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Strain Data
| Strain number | NIES-932 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Raphidiopsis curvata Fritsch & M.F.Rich | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Shinobazu-no-ike Pond, Taito-ku, Tokyo, Japan (2000-07-04) | |||
| Latitude / Longitude | 35.71305555 / 139.76916666 | |||
| Habitat (Isolation source) | Freshwater (Pond water) | |||
| History | < Otsuka, Shigeto | |||
| Isolator (Date of isolation) | Otsuka, Shigeto (2000-07-05) | |||
| Identified by | Otsuka, Shigeto | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Feb] | |||
|
Culture condition (Preculture condition) |
Medium:
CT
Temperature: 24 C Light intensity: 13-16 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 42 D |
|||
| Gene information | Whole-genome ( AP018317 ) , 16S-ITS-23S ( AB638218 ) | |||
| Cell size (min - max) | ||||
| Organization | ||||
| Characteristics | Cyanobacterial water bloom (aoko) ; Planktonic ; Gram negative ; Genome decoded strain | |||
| Other strain no. | Other strain no. : RAP1 | |||
| Remarks | Axenic | |||
| Movie | ||||
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Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-1259
|
Raphidiopsis raciborskii | Blue-green alga ; Cyanobacteria | Freshwater (Pond water) | Cyanobacterial water bloom (aoko) ; Non-toxic ; Planktonic |
|
NIES-992 |
Raphidiopsis raciborskii | Blue-green alga ; Cyanobacteria | Freshwater (Pond water) | Cyanobacterial water bloom (aoko) ; Non-toxic (Zarenezhad et al. 2012) ; Planktonic |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-23 |
Anabaena variabilis | Blue-green alga ; Cyanobacteria | Genome decoded strain | |
|
NIES-100 |
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) ; ST8 (Tanabe et al. 2007) |
NIES-512
|
Pseudanabaena foetida | Blue-green alga ; Cyanobacteria | Freshwater (Pond water) | Offensive odor ; Test strain (Nagai, T., 2016) ; 2-MIB production (Iwase et al. 2010) ; Type strain (Tuji & Niiyama 2016) |
NIES-592
|
Mastigocladus sp. | Blue-green alga ; Cyanobacteria | Hot spring (Water) | Benthic ; Genome decoded strain (Zhu et al. 2017) |
|
NIES-835 |
Dolichospermum compactum | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) |
| Reference |
|---|
|
Hamana, K., Kobayashi, M., Yokota, A., Sekiguchi, H., Niitsu, M.
2008
Cellular polyamine profiles in cyanobacteria.
Microbiol. Cult. Coll.,
24,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 26, 33, 36, 46, 206, 208, 230, 267, 268, 305, 361, 416, 433, 434, 481, 507, 597, 598, 931, 932, 1031, 2115, 2133, 2135 Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S. 2012 Detection and identification of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes. Harmful Algae, 16, 49-57. Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116 DOI: 10.1016/j.hal.2012.01.003 MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G. 2020 Origin and evolution of carboxysome positioning systems in cyanobacteria. Mol. Biol. Evol., 37, 1434–1451. Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Jiang, Y., Chen, Y., Yang, S., Li, R. 2020 Phylogenetic relationships and genetic divergence of paralytic shellfish toxin- and cylindrospermopsin- producing Cylindrospermopsis and raphidiopsis. Harmful Algae, 93, 101792 (article ID). Keywords: Biosynthesis; Cyanotoxin; Cylindrospermopsin; Gene cluster; Phylogeny; Saxitoxin Strain(s): 932, 991, 1041 PubMed: 32307073 DOI: 10.1016/j.hal.2020.101792 Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578. Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 |
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