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Strain Data
| Strain number | NIES-970 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Synechococcus sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria ; Picoplankton | |||
| Locality (Date of collection) | Tokunoshima Isl., Kagoshima, (1998-08-28) | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Marine (Tidal flat sand water) | |||
| History | < Tezuka, Naoaki | |||
| Isolator (Date of isolation) | Tezuka, Naoaki (1998-10-**) | |||
| Identified by | Tezuka, Naoaki | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic | |||
|
Culture condition (Preculture condition) |
Medium:
ESM
Temperature: 20 C Light intensity: 9-15 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | Whole-genome ( AP017959 ) , 16S rRNA ( AF448073 ) | |||
| Cell size (min - max) | 1 - 2 μm | |||
| Organization | Unicellular | |||
| Characteristics | Picoplankton ; Genome decoded strain (Shimura et al. 2017) | |||
| Other strain no. | Other strain no. : T71 | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
|
Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-947 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Picoplankton ; group I (Suzuki et al. 2022) |
|
NIES-969 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; SC5.1, VIc (Suzuki et al. 2022) |
|
NIES-971 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sand water) | Picoplankton ; Euryhaline ; group K (Suzuki et al. 2022) |
|
NIES-972 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat seawater) | Euryhaline |
|
NIES-979 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sediment) | Picoplankton |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-3277
|
Synechococcus leopoliensis | Blue-green alga ; Cyanobacteria | Genome decoded strain | |
|
NIES-978 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sediment) | Euryhaline |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-939 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Euryhaline |
|
NIES-4074 |
Cylindrospermum sp. | Blue-green alga ; Cyanobacteria | Terrestrial (Soil) | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain |
|
NIES-941 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | |
|
NIES-1344 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | group B (Suzuki et al. 2022) |
|
NIES-955 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | group E (Suzuki et al. 2022) |
| Reference |
|---|
|
Shimura, Y., Hirose, Y., Misawa, N., Wakazuki, S., Fujisawa, T., Nakamura, Y., Kanesaki, Y., Yamaguchi, H., Kawachi, M.
2017
Complete genome sequence of coastal cyanobacterium Synechococcus sp. strain NIES-970.
GenomeA,
5,
e00139-17 (article ID).
Strain(s): 970 PubMed: 28385852 DOI: 10.1128/genomeA.00139-17 MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G. 2020 Origin and evolution of carboxysome positioning systems in cyanobacteria. Mol. Biol. Evol., 37, 1434–1451. Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Suzuki, S., Yamaguchi, H., Kawachi, M. 2022 Potential genetic diversity of Synechococcus-related strains maintained in the Microbial Culture Collection of the National Institute for Environmental Studies, Japan. Microb. Resour. Syst., 38, 63-74. Keywords: Synechococcus; Cyanobium; picoplankton; molecular marker Strain(s): 937, 938, 939, 940, 941, 942, 943, 945, 946, 947, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 981, 982, 983, 984, 985, 986, 987, 988, 1341, 1342, 1343, 1344, 1345, 1346, 1347, 1348 DOI: 10.60369/microresys.38.2_63 Giordano, M., Goodman, C. A., Huang, F., Raven, J. A., Ruan, Z. 2022 A mechanistic study of the influence of nitrogen and energy availability on the NH4+ sensitivity of nitrogen assimilation in Synechococcus. J. Exp. Bot., 73, 5596-5611. Keywords: Ammonium; cyanobacteria; glutamine synthetase; limitation; nitrate reductase; nitrite reductase; NtcA regulation; N metabolism Strain(s): 25, 50, 204, 267, 843, 970, 981, 2107, 2134, 2135, 2481, 2549, 3709, 3754, 3756, 3757, 4074 PubMed: 35595516 DOI: 10.1093/jxb/erac219 |
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