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Strain Data
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| Strain number | NIES-1045 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Cylindrotheca closterium (Ehrenberg) Reimann & J.C.Lewin | |||
| Synonym | Ceratoneis closterium Ehrenberg 1839; Nitzschia closterium (Ehrenberg) W.Smith 1853; Nitzschiella closterium (Ehrenberg) Rabenhorst 1864; Nitzschia longissima var. closterium (Ehrenberg) Van Heurck 1885; Homoeocladia closterium (Ehrenberg) Kuntze 1898; Nitzschiella tenuirostris Mereschkowsky 1901 | |||
| Former name | ||||
| Common name | Pennate diatom | |||
| Locality (Date of collection) | Tskuba University, Shimoda Marine Research Center, Shimoda, Shizuoka, Japan (2001-05-10) | |||
| Latitude / Longitude | 34.6667553418794 / 138.938901864104 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Mayama, Shigeki | |||
| Isolator (Date of isolation) | Takahashi, Yuko (2001-05-11) | |||
| Identified by | Mayama, Shigeki | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
f/2
Temperature: 15 C Light intensity: 24 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
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| Gene information | ||||
| Cell size (min - max) | 10 - 120 μm | |||
| Organization | Unicellular | |||
| Characteristics | Epilithic | |||
| Other strain no. | ||||
| Remarks | ||||
| Movie | https://www.youtube.com/watch?v=7nSawAhdmx4&list=PLFTJlLsZcVbiJY3ygYAPKeVOfDdOh9UEW&index=6 | |||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-2351
|
Cylindrotheca fusiformis | Pennate diatom | ||
|
NIES-1046 |
Cylindrotheca fusiformis | Pennate diatom | Marine (Seawater) | Benthic |
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Related strain information
(Used in same reference)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2534 |
Skeletonema dohrnii | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
|
NIES-1384 |
Ophiocytium capitatum | Freshwater (Pond water) | ||
|
NIES-1975 |
Chattonella marina | Marine (Seawater) | Red tide | |
NIES-324
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Test strain (Khanam et al. 2017) ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2716 |
Hemiselmis andersenii | Marine (Seawater) | Genome decoded strain (Suzuki et al. 2022) | |
| Reference |
|---|
|
Kamikawa, R., Sanchez-Perez, G. F., Sako, Y., Roger, A. J., Inagaki, Y.
2009
Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes.
Mol. Phylogenet. Evol.,
53,
565-570.
Keywords: Methionine adenosyltransferase; Lateral gene transfer; Diaoms; Aureococcus; Haptophytes; Cryptomonads Strain(s): 17, 350, 417, 534, 586, 1045, 1349 PubMed: 19577655 DOI: 10.1016/j.ympev.2009.06.016 Fukuda, S., Iwamoto, K., Atsumi, M., Yokoyama, A., Nakayama, T., Ishida, K-I., Inouye, I., Shiraiwa, Y. 2014 Global searches for microalgae and aquatic plants that can eliminate radioactive cesium, iodine and strontium from the radio-polluted aquatic environment: a bioremediation strategy. J. Plant Res., 127, 79-89. Keywords: Algal phytoremediation; Bioaccumulation; Radiopollution; Radionuclide elimination; Radioactive cesium; The Fukushima 1 Nuclear Power Plant accident Strain(s): 24, 36, 71, 155, 160, 203, 233, 246, 329, 333, 391, 405, 417, 440, 487, 503, 529, 531, 538, 548, 553, 587, 597, 678, 727, 805, 843, 859, 931, 995, 1003, 1012, 1015, 1017, 1031, 1044, 1045, 1259, 1326, 1331, 1377, 1382, 1388, 1411, 1435, 1439, 1440, 1441, 1442, 1458, 1728, 1826, 1831, 1833, 1840, 1846, 1862, 1865, 1956, 2131, 2144, 2146, 2147, 2150, 2175, 2176, 2185, 2268, 2325, 2341, 2352, 2377, 2412, 2437, 2854, 2855, 2856, 2858, 2859, 2860 PubMed: 24346654 DOI: 10.1007/s10265-013-0596-9 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 DOI: 10.60369/microresys.33.1_19 |
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