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Strain Data
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| Strain number | NIES-1334 | |||
|---|---|---|---|---|
| Phylum | Kathablepharida | |||
| Class | Kathablepharidea | |||
| Scientific name | Kathablepharis japonica Okamoto & Inouye | |||
| Synonym | ||||
| Former name | ||||
| Common name | ||||
| Locality (Date of collection) | Tokyo Bay Japan (2004-01-20) | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < TKB; | |||
| Isolator (Date of isolation) | Okamoto, Noriko (2004-03-15) | |||
| Identified by | Okamoto, Noriko | |||
| State of strain | Subculture; Mixed (Chrysochromulina sp. NIES-1333 as food); Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
mIMR
Temperature: 20 C Light intensity: 4-5 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
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| Gene information | 18S rRNA ( AB193602 AB231617 ) , 28S rRNA ( FJ973371 ) , act ( FJ973392 ) , atub ( FJ973409 ) , beta-tubulin ( FJ973419 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular; Flagellate | |||
| Characteristics | Heterotrophic ; Phagotrophic | |||
| Other strain no. | Other strain no. : TKB-090 (nrc066) | |||
| Remarks | ||||
| Movie | ||||
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Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2584 |
Lotharella reticulosa | Marine (Seawater) | Planktonic | |
|
NIES-1438 |
Bicosoeca sp. | Marine (Seawater) | Heterotrophic ; Phagotrophic ; Benthic | |
NIES-2878
|
Umbilicosphaera foliosa | Coccolithophore | Marine (Seawater) | |
NIES-324
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Test strain (Khanam et al. 2017) ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
NIES-274
|
Cryptomonas ovata | Freshwater (Pond water) | ||
| Reference |
|---|
|
Okamoto, N. & Inouye, I.
2005
The katablepharids are a distant sister group of the Cryptophyta: a proposal for Katablepharidophyta divisio nova/Kathablepharida phylum novum based on SSU rDNA and beta-tubulin phylogeny.
Protist,
156,
163-179.
Keywords: beta-tubulin; Cryptophyta; Katablepharidophyta/Kathablepharida; Katablepharis/Kathablepharis japonica; Leucocrypta; Leucocryptos marina; phylogeny; SSU rDNA Strain(s): 1333, 1334, 1335 PubMed: 16171184 DOI: 10.1016/j.protis.2004.12.003 Reeb, V. C., Peglar, M. T., Yoon, H. S., Bai, J. R., Wu, M., Siu, P., Grafenberg, J. L., Reyes-Prieto, A., Rummele, S. E., Gross, J., Bhattacharya, D. 2009 Interrelationships of chromalveolates within a broadly sampled tree of photosynthetic protists. Mol. Phylogenet. Evol., 53, 202–211. Keywords: Chromalveolata; Multigene phylogenetics; Plastidophila; Rhizaria; Supergroup; Tree of life Strain(s): 1334, 1335 PubMed: 19398025 DOI: 10.1016/j.ympev.2009.04.012 Kashiyama, Y. et al. 2019 Taming chlorophylls by early eukaryotes underpinned algal interactions and the diversification of the eukaryotes on the oxygenated Earth. ISME J., 13, 1899-1910. Strain(s): 8, 254, 274, 286, 324, 331, 353, 381, 494, 623, 624, 997, 1012, 1013, 1015, 1320, 1330, 1333, 1334, 1335, 1372, 1377, 1388, 1390, 1396, 1397, 1408, 1438, 1439, 1441, 1964, 2008, 2142, 2144, 2149, 2300, 2305, 2325, 2433, 2498, 2502, 2566, 2584, 2586, 2589, 2590, 2677, 2878, 3356, 3374, 3775, 4477, 4478 PubMed: 30809012 DOI: 10.1038/s41396-019-0377-0 |
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