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Strain Data
| Strain number | NIES-1363 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Chlorophyceae | |||
| Scientific name | Pleodorina starrii Nozaki, Ott & Coleman | |||
| Synonym | ||||
| Former name | ||||
| Common name | Green alga | |||
| Locality (Date of collection) | Lake Sagami, Kanagawa, Japan (2000-06-02) | |||
| Latitude / Longitude | 35.6127439121 / 139.18283003 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < Nozaki, Hisayoshi | |||
| Isolator (Date of isolation) | (2000-06-02) | |||
| Identified by | Nozaki, Hisayoshi | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2024 Dec] | |||
|
Culture condition (Preculture condition) |
Medium:
AF-6
;
VTAC
Temperature: 20 C Light intensity: 3 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M |
|||
| Gene information | Whole-genome ( BRXT00000000 ) , Mitochondrial genome ( JX977845 ) , Plastid genome ( JX977846 ) , MID ( BAF42661 ) | |||
| Cell size (min - max) | ||||
| Organization | Colonial; Flagellate | |||
| Characteristics | Other water bloom ; Phototaxis ; Authentic strain (Nozaki et al. 2006) ; Heterothallic ; Anisogamous ; Male ; Genome decoded strain (Takahashi et al. 2003;（ Smith et al. 2013) | |||
| Other strain no. | Other strain no. : 2000-602-P15 | |||
| Remarks | Axenic | |||
| Movie | ||||
|
Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-1361 |
Pleodorina starrii | Green alga | Freshwater (Lake water) | Other water bloom ; Phototaxis ; Heterothallic ; Anisogamous ; Male |
|
NIES-1362 |
Pleodorina starrii | Green alga | Freshwater (Lake water) | Other water bloom ; Phototaxis ; Heterothallic ; Anisogamous ; Female |
|
NIES-1364 |
Pleodorina starrii | Green alga | Freshwater (Lake water) | Other water bloom ; Phototaxis ; Heterothallic ; Anisogamous ; Male ; F1 strains (NIES-1852, 1853, 1854) |
|
NIES-1366 |
Pleodorina starrii | Green alga | Freshwater (Lake water) | Other water bloom ; Phototaxis ; Heterothallic ; Anisogamous ; Female ; F1 strains (NIES-1852, 1853, 1854) |
|
NIES-1852 |
Pleodorina starrii | Green alga | Freshwater (Lake water) | Other water bloom ; Phototaxis ; Heterothallic ; Anisogamous ; Male ; F1 clone of NIES-1364, 1365 and 1366 |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-577
|
Pleodorina japonica | Green alga | Freshwater (Paddy water) | Phototaxis ; Authentic strain ; Homothallic ; Dioecious ; Anisogamou ; Harboring rickettsial endosymbionts (Kawafune et al. 2012) |
|
NIES-735 |
Pleodorina californica | Green alga | (Freshwater) | Phototaxis |
NIES-576
|
Pleodorina japonica | Green alga | Freshwater (Paddy water) | Phototaxis |
NIES-736
|
Pleodorina indica | Green alga | (Soil) | Phototaxis |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-4482 |
Pleodorina starrii | Green alga | Freshwater (Reservoir water) | Phototaxis ; Bisexual strain |
|
NIES-725 |
Eudorina peripheralis | Green alga | Freshwater (Soil) | Phototaxis ; Heterothallic |
|
NIES-4484 |
Pleodorina starrii | Green alga | Freshwater | Phototaxis ; F1 clone of NIES-4481×4482 ; Unisexual female |
|
NIES-732 |
Volvox carteri | Green alga ; Volvocine alga | Freshwater (Paddy soil) | Phototaxis ; Authentic strain ; Heterothallic ; Dioecious ; Oogamy ; Female ; Crosses with NIES-733 |
|
NIES-3780 |
Volvox africanus | Green alga ; Volvocine alga | Freshwater (Lake water) | Phototaxis ; Homothallic ; Monoecious with male ; Oogamy ; F1 strain (NIES-3784) ; Genome decoded strain (Yamamoto et al. 2021) |
| Reference |
|---|
|
Nozaki, H., Ott, F. D., Coleman, A. W.
2006
Morphology, molecular phylogeny and taxonomy of two new species of Pleodorina (Volvocaceae, Chlorophyceae).
J. Phycol.,
42,
1072-1080.
Keywords: colonial Volvocales; molecular phylogeny; morphology; Pleodorina starrii sp. nov.; Pleodorina thompsonii sp. nov.; taxonomy Strain(s): 456, 460, 541, 544, 577, 666, 720, 721, 722, 724, 725, 728, 730, 731, 732, 734, 735, 736, 863, 865, 866, 867, 868, 869, 872, 891, 892, 1362, 1363, 4126, 4127 DOI: 10.1111/j.1529-8817.2006.00255.x Smith, D. R., Hamaji, T., Olson, B. J., Durand, P. M., Ferris, P., Michod, R. E., Featherston, J., Nozaki, H., Keeling, P. J. 2013 Organelle genome complexity scales positively with organism size in volvocine green algae. Mol. Biol. Evol., 30, 793-797. Keywords: Chlamydomonas; Gonium; Pleodorina; Volvox; mitochondrion; chloroplast Strain(s): 1363 PubMed: 23300255 DOI: 10.1093/molbev/mst002 Hunsperger, H. M., Randhawa, T., Cattolico, R. A. 2015 Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. BMC Evol. Biol., 15, 16 (article ID). Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 Takahashi, K., Kawai-Toyooka, H., Ootsuki, R., Hamaji, T., Tsuchikane, Y., Sekimoto, H., Higashiyama, T., Nozaki, H. 2021 Three sex phenotypes in a haploid algal species give insights into the evolutionary transition to a self-compatible mating system. Evolution, 75, 2984-2993. Keywords: Haploid species; inbreeding; life-history evolution; mating systems; reproductive isolation; sex Strain(s): 456, 460, 541, 544, 731, 732, 872, 891, 892, 1362, 1363, 2569, 3382, 3383, 3780, 3782, 4066, 4068, 4479, 4480, 4481, 4482, 4483, 4484 PubMed: 34250602 DOI: 10.1111/evo.14306 Lindsey, C. R., Rosenzweing, F., Herron, M. D. 2021 Phylotranscriptomics points to multiple independent origins of multicellularity and cellular differentiation in the volvocine algae. BMC Biol., 19, 182 (article ID). Keywords: Phylotranscriptomics; Volvocine algae; Green algae; Phylogeny; Multicellularity Strain(s): 418, 456, 458, 460, 541, 543, 544, 564, 566, 568, 572, 582, 653, 654, 717, 719, 720, 722, 725, 728, 730, 732, 736, 737, 851, 856, 863, 867, 868, 878, 882, 890, 893, 895, 1362, 1363, 2569, 2863, 3383, 4126, 4127, 4128 DOI: 10.1101/2021.03.16.435725 Takahashi, K., Suzuki, S., Kawai-Toyooka, H., Yamamoto, K., Hamaji, T., Ootsuki, R., Yamaguchi, H., Kawachi, M., Higashiyama, T., Nozaki, H. 2023 Reorganization of the ancestral sex-determining regions during the evolution of trioecy in Pleodorina starrii. Commun. Biol., 6, 590 (article ID). Strain(s): 1363, 4479, 4480, 4481, 4482 PubMed: 37296191 DOI: 10.1038/s42003-023-04949-1 Yamagishi, S., Yamamoto, K., Takahashi, K., Kawai-Toyooka, H., Suzuki, S., Matsuzaki, R., Yamaguchi, H., Kawachi, M., Higashiyama, T., Nozaki, H. 2024 Evolutionary analysis of MID homologs during the transition from homothallic species to heterothallic species in Volvox sect. Volvox (Chlorophyceae). Phycol. Res., 72, 46-55. Keywords: male gamete; mating system; minus dominance gene (MID); molecular evolution; sex; sperm packet; volvocine green algae Strain(s): 289, 456, 460, 541, 544, 545, 569, 572, 574, 582, 652, 653, 654, 732, 851, 852, 857, 872, 891, 892, 1362, 1363, 1708, 1710, 1859, 2457, 2569, 2735, 2736, 2740, 3382, 3383, 3780, 3782, 3786, 3874, 3984, 3986, 3988, 4021, 4025, 4336, 4432, 4535, 4536, 4537 DOI: 10.1111/pre.12538 Chen, Y., Xiong, Q., Dai, Q., Liu, G. 2025 Six newly sequenced chloroplast genomes from quadriflagellate Chlamydomonadales (Chlorophyceae): Phylogeny and comparative genome analyses. Genome Biol. Evol., 17, evaf074 (article ID). Keywords: quadriflagellate chlamydomonadaleans; phylogenomics; Corbierea; PubMed: 40247659 DOI: 10.1093/gbe/evaf074 |
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