Strain Data

Strain number		NIES-2104
Phylum		Cyanophyta
Class		Cyanophyceae
Scientific name		Leptolyngbya sp.
Synonym
Former name
Common name		Blue-green alga ; Cyanobacteria
Locality (Date of collection)		Harima Campus for Science, Univrersity of Hyogo, Himeji, Hyogo Japan (2002--)
Latitude / Longitude		34.928516 / 134.445362
Habitat (Isolation source)		Terrestrial
History		< IAM (2007) < Katoh, Hiroshi
Isolator (Date of isolation)		Katoh, Hiroshi
Identified by		Katoh, Hiroshi
State of strain		Cryopreservation; Unialgal; Clonal; Axenic[2013 Dec]
Culture condition (Preculture condition)		Medium: BG-11 (agar) Temperature: 20 C Light intensity: 9-10 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 4 M
Gene information		Whole-genome ( BBWW00000000 ) , apcB ( WP_059000224 )
Cell size (min - max)
Organization
Characteristics		Drought tolerance ; Genome decoded strain (Shimura et al. 2015)
Other strain no.		Other collection strain no. : IAM M-289 Other strain no. : HK-04
Remarks		Cryopreserved; Axenic
Movie

Related strain information (Large number of orders and same genus or species)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-30	Leptolyngbya sp.	Blue-green alga ; Cyanobacteria	Freshwater (Paddy field)	Genome decoded strain (Zhu et al. 2017)
NIES-2129	Leptolyngbya sp.	Blue-green alga ; Cyanobacteria
NIES-3755	Leptolyngbya sp.	Blue-green alga ; Cyanobacteria	Terrestrial (Soil)	Genome decoded strain (Hirose et al. 2016)
NIES-2118	Leptolyngbya sp.	Blue-green alga ; Cyanobacteria
NIES-2103	Leptolyngbya sp.	Blue-green alga ; Cyanobacteria	Terrestrial	Drought tolerance

Related strain information (Whose relevance due to simultaneous purchases and other information is inferred by AI)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-2135	Leptolyngbya boryana	Blue-green alga ; Cyanobacteria		Genome decoded strain

Related strain information (Used in same reference)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-39	Arthrospira platensis	Blue-green alga ; Cyanobacteria	Salt water	Autotrophic ; Genome decoded strain (Fujisawa et al. 2010) ; Hydrogen evolution ; Contains good quality of proteins
NIES-905	Planktothrix agardhii	Blue-green alga ; Cyanobacteria	Freshwater	Cyanobacterial water bloom (aoko) ; Toxicity ; Planktonic ; Genome decoded strain (Suzuki et al. 2019)
NIES-824	Dolichospermum smithii	Blue-green alga ; Cyanobacteria	Freshwater (Lake water)	Cyanobacterial water bloom (aoko) ; Offensive odor ; geosmin production (Matsushita et al. 2010)
NIES-3754	Mastigocladus sp.	Blue-green alga ; Cyanobacteria	Hot spring (Water)	Genome decoded strain (Hirose et al. 2016)
NIES-512	Pseudanabaena foetida	Blue-green alga ; Cyanobacteria	Freshwater (Pond water)	Offensive odor ; Test strain (Nagai, T., 2016) ; 2-MIB production (Iwase et al. 2010) ; Type strain (Tuji & Niiyama 2016)

Reference
Shimura, Y., Hirose, Y., Misawa, N., Osana, Y., Katoh, H., Yamaguchi, H., Kawachi, M. 2015 Comparison of the terrestrial cyanobacterium Leptolyngbya sp. NIES-2104 and the freshwater Leptolyngbya boryana PCC 6306 genomes. DNA Res., 22, 403-412. Keywords: comparative genomics; cyanobacteria; genome sequence; nitrogen fixation Strain(s): 2104 PubMed: 26494835 DOI: 10.1093/dnares/dsv022 Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627. Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR Strain(s): 81, 512, 824, 905, 2104, 2116 PubMed: 27607443 DOI: 10.1016/j.envres.2016.08.034 Moten, D., Batsalova, T., Basheva, D., Mladenov, R., Dzhambazov, B., Teneva, I. 2018 Outer membrane efflux protein (OMEP) is a suitable molecular marker for resolving the phylogeny and taxonomic status of closely related cyanobacteria. Phycol. Res., 66, 31-36. Keywords: cyanobacterial taxonomy; phylogenetic analysis; transmembrane transporter sequences Strain(s): 39, 843, 2104, 3754, 3755, 3756, 3757 DOI: 10.1111/pre.12203 Liu, J. Y., Jiang, T., Zhang, J. P., Liang, D. C. 1999 Crystal structure of allophycocyanin from red algae Porphyra yezoensis at 2.2-angstrom resolution. J. Biol. Chem., 274, 16945-16952. Strain(s): 2104 PubMed: 10358042 DOI: 10.1074/jbc.274.24.16945 Guo, Y., Zang, X., Cao, X., Zhang, F., Sun, D., Shang, M., Li, R., Yangzong, Z., Wei, X., Zhang, X. 2020 Cloning and expression of Allophycocyanin gene from Gracilariopsis lemaneiformis and studying the binding sites of phycocyanobilin on its α and β subunits. J. Appl. Phycol., 32, 2657-2671. Keywords: Gracilariopsis lemaneiformis; Rhodophyta; Allophycocyanin; Expression; Fluorescence Strain(s): 2104 DOI: 10.1007/s10811-020-02102-7

Reference

Shimura, Y., Hirose, Y., Misawa, N., Osana, Y., Katoh, H., Yamaguchi, H., Kawachi, M. 2015 Comparison of the terrestrial cyanobacterium Leptolyngbya sp. NIES-2104 and the freshwater Leptolyngbya boryana PCC 6306 genomes. DNA Res., 22, 403-412.
Keywords: comparative genomics; cyanobacteria; genome sequence; nitrogen fixation
Strain(s): 2104
PubMed: 26494835
DOI: 10.1093/dnares/dsv022

Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627.
Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR
Strain(s): 81, 512, 824, 905, 2104, 2116
PubMed: 27607443
DOI: 10.1016/j.envres.2016.08.034

Moten, D., Batsalova, T., Basheva, D., Mladenov, R., Dzhambazov, B., Teneva, I. 2018 Outer membrane efflux protein (OMEP) is a suitable molecular marker for resolving the phylogeny and taxonomic status of closely related cyanobacteria. Phycol. Res., 66, 31-36.
Keywords: cyanobacterial taxonomy; phylogenetic analysis; transmembrane transporter sequences
Strain(s): 39, 843, 2104, 3754, 3755, 3756, 3757
DOI: 10.1111/pre.12203

Liu, J. Y., Jiang, T., Zhang, J. P., Liang, D. C. 1999 Crystal structure of allophycocyanin from red algae Porphyra yezoensis at 2.2-angstrom resolution. J. Biol. Chem., 274, 16945-16952.
Strain(s): 2104
PubMed: 10358042
DOI: 10.1074/jbc.274.24.16945

Guo, Y., Zang, X., Cao, X., Zhang, F., Sun, D., Shang, M., Li, R., Yangzong, Z., Wei, X., Zhang, X. 2020 Cloning and expression of Allophycocyanin gene from Gracilariopsis lemaneiformis and studying the binding sites of phycocyanobilin on its α and β subunits. J. Appl. Phycol., 32, 2657-2671.
Keywords: Gracilariopsis lemaneiformis; Rhodophyta; Allophycocyanin; Expression; Fluorescence
Strain(s): 2104
DOI: 10.1007/s10811-020-02102-7

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