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Strain Data
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| Strain number | NIES-2119 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Phormidium ambiguum Gomont | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | ||||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | ||||
| History | < IAM (2007) < Murano, Fumio | |||
| Isolator (Date of isolation) | Murano, Fumio | |||
| Identified by | Fukushima, Hiroshi | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Non-axenic[2016 Dec.] | |||
|
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 C Light intensity: 13-18 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M |
|||
| Gene information | Whole-genome ( MRCE00000000 ) , 16S rRNA ( AB003167 ) | |||
| Cell size (min - max) | - 7 μm | |||
| Organization | Filamentous | |||
| Characteristics | Offensive odor ; geosmin production (Iwase et al. 2010) ; Hydrogen evolution ; Attached ; Genome decoded strain (Zhu et al. 2017) | |||
| Other strain no. |
Other collection strain no. : IAM M-71
Other strain no. : Murano 394 (W1-27(1)) |
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| Remarks | Cryopreserved | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-503 |
Phormidium foveolarum | Blue-green alga ; Cyanobacteria | Freshwater (Stream sediment) | |
|
NIES-2121 |
Phormidium sp. | Blue-green alga ; Cyanobacteria | Terrestrial (Soil) | |
NIES-507
|
Phormidium jenkelianum | Blue-green alga ; Cyanobacteria | Freshwater (River sediment) | |
|
NIES-2128 |
Phormidium sp. | Blue-green alga ; Cyanobacteria | ||
|
NIES-2115 |
Phormidium sp. | Blue-green alga ; Cyanobacteria | ||
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-32 |
Phormidium foveolarum | Blue-green alga ; Cyanobacteria | Freshwater | |
|
NIES-34 |
Phormidium foveolarum | Blue-green alga ; Cyanobacteria | ||
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-610 |
Planktothrix rubescens | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Toxicity (Sano et al. 1995b) ; Type strain |
NIES-39
|
Arthrospira platensis | Blue-green alga ; Cyanobacteria | Salt water | Autotrophic ; Genome decoded strain (Fujisawa et al. 2010) ; Hydrogen evolution ; Contains good quality of proteins |
NIES-27
|
Spirulina subsalsa | Blue-green alga ; Cyanobacteria | ||
|
NIES-2093 |
Anabaena variabilis | Blue-green alga ; Cyanobacteria | Freshwater | Mostly fragmented |
NIES-28
|
Desmonostoc sp. | Blue-green alga ; Cyanobacteria | ||
| Reference |
|---|
|
Asada, Y. & Kawamura, S.
1986
Screening for cyanobacteria that evolve molecular hydrogen under dark and anaerobic conditions.
J. Ferment. Technol.,
64,
553-556.
Strain(s): 19, 21, 23, 36, 39, 46, 2119, 3277 DOI: 10.1016/0385-6380(86)90081-6 Hosoya, R., Hamana, K., Isobe, M., Yokota, A. 2005 Polyamine distribution profiles within Cyanobacteria. Microbiol. Cult. Coll., 21, 3-8. Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 Ishida, T., Yokota, A., Sugiyama, J. 1997 Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence. J. Gen. Appl. Microbiol., 43, 237-241. Keywords: filamentous cyanobacteria; molecular phylogeny; Oscillatoriales; 16S rRNA Strain(s): 27, 208, 510, 2116, 2118, 2119, 2128 PubMed: 12501325 DOI: 10.2323/jgam.43.237 Honda, D., Yokota, A., Sugiyama, J. 1999 Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains. J. Mol. Evol., 48, 723-739. Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models Strain(s): 27, 208, 510, 2116, 2118, 2119 PubMed: 10229577 DOI: 10.1007/PL00006517 Ishida, T., Watanabe, M. M., Sugiyama, J., Yokota, A. 2001 Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis. FEMS Microbiol. Lett., 201, 79-82. Keywords: cyanobacterium; Pleurocapsales; 16S rDNA; phylogeny Strain(s): 27, 208, 510, 2116, 2118, 2119, 2128 PubMed: 11445171 DOI: 10.1111/j.1574-6968.2001.tb10736.x Iwase, S., Abe, T. 2010 Identification and change in concentration of musty-odor compounds during frowth in blue-green algae. J. Sch. Marine Sci. Tech., Tokai Univ., 8, 27-33. Strain(s): 512, 2119 Zhu, T., Hou, S., Lu, X., Hess, W. R. 2017 Draft genome sequences of nine cyanobacterial strains from diverse habitats. GenomeA, 5, e01676-16 (article ID). Strain(s): 30, 208, 592, 593, 1031, 2101, 2119, 2130 PubMed: 28254973 DOI: 10.1128/genomeA.01676-16 Senavirathna, M. D. H. J. & Jayasekara, M. A. D. D. 2023 Temporal variation of 2-MIB and geosmin production by Pseudanabaena galeata and Phormidium ambiguum exposed to high-intensity light. Water Environ. Res., 95, e10834 (article ID). Keywords: extreme light; filamentous cyanobacteria; growth suppression; odorous compounds; stress response Strain(s): 512, 2119 PubMed: 36635233 DOI: 10.1002/wer.10834 Asaeda, T., Rahman, M., Akimoto, J., Nohara, A., Imamura, F. 2024 Hydrogen peroxide concentration as an indicator of cyanobacterial response to diurnal variation in light intensity. Sci Rep, 14, 29046 (article ID). Keywords: Cyanobacteria; Hydrogen peroxide; Photoinhibition; Diurnal behaviors; Antioxidant activity; Oxidative stress Strain(s): 111, 2119 PubMed: 39580530 DOI: 10.1038/s41598-024-80269-6 Senavirathna, M. D. H. J. & Jayasekara, M. A. D. D. 2025 Influence of temperature regimes on the production of 2‐MIB and geosmin by Pseudanabaena galeata and Phormidium ambiguum. Water Environ. Res., 97, e70201 (article ID). Strain(s): 512, 2119 PubMed: 41177969 DOI: 10.1002/wer.70201 |
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