| Strain number | NIES-3275 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Microchaete diplosiphon Gomont ex Bornet & Flahault | |||
| Synonym | Fremyella diplosiphon (Gomont ex Bornet & Flahault) Drouet | |||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Yale USA | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | ||||
| History | < IAM (2007) < BIU (UTEX; 1961); | |||
| Isolator (Date of isolation) | Strout (1952-**-**) | |||
| Identified by | ||||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2013 Nov] | |||
|
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 C Light intensity: 4-6 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 5 M |
|||
| Gene information | Whole-genome ( AP018233 ) , Plasmid DNA ( AP018234-AP018247 ) | |||
| Cell size (min - max) | 2 - 20 μm | |||
| Organization | ||||
| Characteristics | Genome decoded strain | |||
| Other strain no. |
Other collection strain no. : IAM M-100; PCC 7601; CCAP 1429/1; UTEX 481; SAG 1410-2
|
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| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
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Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-88 |
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) ; Toxicity ; microcystin (+) (Tanabe et al. 2009b) ; ST3 (Tanabe et al. 2007) ; Genome decoded strain (Parajuli et al. 2016) |
|
NIES-970 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sand water) | Picoplankton ; Genome decoded strain (Shimura et al. 2017) |
|
NIES-2096 |
Anacystis marina | Blue-green alga ; Cyanobacteria | Freshwater | |
|
NIES-2098 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain | |
|
NIES-4106 |
Pelatocladus sp. | Blue-green alga ; Cyanobacteria | Terrestrial (Soil) | Nitrogen fixation ; Attached ; Genome decoded strain |
| Reference |
|---|
|
Hosoya, R., Hamana, K., Isobe, M., Yokota, A.
2005
Polyamine distribution profiles within Cyanobacteria.
Microbiol. Cult. Coll.,
21,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 Hamana, K., Miyagawa, K., Matsuzaki, S. 1983 Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria. Biochem. Biophys. Res. Commun., 112, 606-613. Strain(s): 19, 37, 39, 2129, 3275 PubMed: 6405746 DOI: 10.1016/0006-291X(83)91507-3 MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G. 2020 Origin and evolution of carboxysome positioning systems in cyanobacteria. Mol. Biol. Evol., 37, 1434–1451. Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Pratte, B. S. & Thiel, T. 2021 Comparative genomic insights into culturable symbiotic cyanobacteria from the water fern Azolla. Microb. Genomics, 7, 000595 (article ID). Strain(s): 25, 3275 PubMed: 34181515 DOI: 10.1099/mgen.0.000595 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 Nowruzi, B., Hutarova, L., Vešelenyiova, D., Metcalf, J. S. 2024 Characterization of Neowestiellopsis persica A1387 (Hapalosiphonaceae) based on the cpcA, psbA, rpoC1, nifH and nifD gene sequences. BMC Ecol. Evol., 24, 57 (article ID). Keywords: Cyanobacteria; Phylogenetic analysis; Neowestiellopsis persica, cpcA Strain(s): 21, 22, 23, 25, 50, 73, 267, 592, 2098, 2100, 2107, 3275, 3754, 3756, 3974, 4073, 4074, 4101, 4103, 4106 PubMed: 38711016 DOI: 10.1186/s12862-024-02244-z |
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