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Strain Data
| Strain number | NIES-2538 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Desmonostoc sp. | |||
| Synonym | ||||
| Former name | Nostoc commune Vaucher ex Bornet & Flahault | |||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Kanazawa University, Kanazawa, Ishikawa, Japan | |||
| Latitude / Longitude | 36.543666 / 136.7093 | |||
| Habitat (Isolation source) | Terrestrial | |||
| History | < Sakamoto, Toshio | |||
| Isolator (Date of isolation) | Sakamoto, Toshio | |||
| Identified by | Sakamoto, Toshio | |||
| State of strain | Cryopreservation; Non-Axenic | |||
|
Culture condition (Preculture condition) |
Medium:
Modified BG-110 (agar)
Temperature: 20 C Light intensity: 4-10 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M |
|||
| Gene information | 16S rRNA ( AB088375 ) , groES, groEL ( AB249674 ) , nrtP ( AB325916 ) , petH ( AB111467 ) , wspA ( AB518000 LC195125 ) , mysA, mysB, mysC, mysD ( LC102213 ) , Dps family protein ( LC369115 LC369111 ) | |||
| Cell size (min - max) | - 5 μm | |||
| Organization | Filamentous | |||
| Characteristics | Drought tolerance ; Nitrogen fixation (aerobic condition, N-Free medium) | |||
| Other strain no. | Other strain no. : KU002 | |||
| Remarks | Cryopreserved; Very slow growth | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2094 |
Desmonostoc sp. | Blue-green alga ; Cyanobacteria | Freshwater | |
NIES-28
|
Desmonostoc sp. | Blue-green alga ; Cyanobacteria | ||
|
NIES-25 |
Desmonostoc sp. | Blue-green alga ; Cyanobacteria | Genome decoded strain | |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2539 |
Nostoc verrucosum | Blue-green alga ; Cyanobacteria | Freshwater | Nitrogen fixation (aerobic condition, N-Free medium) ; Epilithic |
NIES-2107
|
Nostoc carneum | Blue-green alga ; Cyanobacteria | Chromatic adaptation ; Genome decoded strain | |
NIES-2108
|
Nostoc punctiforme | Blue-green alga ; Cyanobacteria | Terrestrial (The lichen Peltigera didactyla) | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain ; Chromatic adaptation |
|
NIES-3990 |
Nostoc commune | Blue-green alga ; Cyanobacteria | Terrestrial | Drought tolerance ; Nitrogen fixation (aerobic condition, N-Free medium) |
|
NIES-3989 |
Nostoc commune | Blue-green alga ; Cyanobacteria | Terrestrial | Drought tolerance ; Nitrogen fixation (aerobic condition, N-Free medium) |
| Reference |
|---|
|
Arima, H., Horiguchi, N., Takaichi, S., Kofuji, R., Ishida, K-I., Wada, K., Sakamoto, T.
2012
Molecular genetic and chemotaxonomic characterization of the terrestrial cyanobacterium Nostoc commune and its neighboring species.
FEMS Microbiol. Ecol.,
79,
34-45.
Keywords: Anhydrobiosis; carotenoid; ferredoxin-NADP; oxidoreductase; nitrate/nitrite transporter; random amplified polymorphic DNA; water stress protein Strain(s): 24, 28, 2107, 2108, 2538, 2539 PubMed: 22066798 DOI: 10.1111/j.1574-6941.2011.01195.x Sakamoto, T., Kumihashi, K., Kunita, S., Masaura, T., Inoue-Sakamoto, K., Yamaguchi, M. 2011 The extracellular-matrix-retaining cyanobacterium Nostoc verrucosum accumulates trehalose, but is sensitive to desiccation. FEMS Microbiol. Ecol., 77, 385-394. Keywords: compatible solute; stress tolerance; extracellular; polysaccharide; water stress protein (WspA) Strain(s): 2538, 2539 DOI: 10.1111/j.1574-6941.2011.01114.x Tamaru, Y., Takani, Y., Yoshida, T., Sakamoto, T. 2005 Crucial role of extracellular polysaccharides in desiccation and freezing tolerance in the terrestrial cyanobacterium Nostoc commune. Appl. Environ. Microbiol., 71, 7327-7333. Strain(s): 2538 PubMed: 16269775 DOI: 10.1128/AEM.71.11.7327-7333.2005 Nazifi, E., Wada, N., Asano, T., Nishiuchi, T., Iwamuro, Y., Chinaka, S., Matsugo, S., Sakamoto, T. 2015 Characterization of the chemical diversity of glycosylated mycosporine-like amino acids in the terrestrial cyanobacterium Nostoc commune. J. Photochem. Photobiol. B-Biol., 142, 154-168. Strain(s): 2538, 3989 PubMed: 25543549 DOI: 10.1016/j.jphotobiol.2014.12.008 Sakamoto, T., Hashimoto, A., Yamaba, M., Wada, N., Yoshida, T., Inoue-Sakamoto, K., Nishiuchi, T., Matsugo, S. 2019 Four chemotypes of the terrestrial cyanobacterium Nostoc commune characterized by differences in the mycosporine‐like amino acids. Phycol. Res., 67, 3-11. Keywords: anhydrobiosis; antioxidant; natural product; polymorphism; UV protectant Strain(s): 2538, 3989, 3990 DOI: 10.1111/pre.12333 Inoue-Sakamoto, K., Tanji, Y., Yamaba, M., Natsume, T., Masaura, T., Asano, T., Nishiuchi, T., Sakamoto, T. 2018 Characterization of extracellular matrix components from the desiccation-tolerant cyanobacterium Nostoc commune. J. Gen. Appl. Microbiol., 64, 15-25. Keywords: anhydrobiosis; desiccation tolerance; extracellular polysaccharide (EPS); superoxide dismutase (SOD); water stress protein (WspA) Strain(s): 2108, 2538, 3989, 3990, 3991 PubMed: 29225284 DOI: 10.2323/jgam.2017.03.001 Inoue-Sakamoto, K., Nazifi, E., Tsuji, C., Asano, T., Nishiuchi, T., Matsugo, S., Ishihara, K., Kanesaki, Y., Yoshikawa, H., Sakamoto, T. 2018 Characterization of mycosporine-like amino acids in the cyanobacterium Nostoc verrucosum. J. Gen. Appl. Microbiol., 64, 203-211. Keywords: antioxidant; environmental adaptation; mycosporine-like amino acid (MAA); mys genes Strain(s): 2538, 2539 PubMed: 29709901 DOI: 10.2323/jgam.2017.12.003 |
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