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Strain Data
| Strain number | NIES-2541 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Trebouxiophyceae | |||
| Scientific name | Chlorella variabilis Shihira & Krauss | |||
| Synonym | Chlorella paramecii Loefer 1936 | |||
| Former name | ||||
| Common name | Green alga | |||
| Locality (Date of collection) | Okazaki, Aichi, Japan | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | (Paramecium bursaria OK1) | |||
| History | < Hoshina, Ryo | |||
| Isolator (Date of isolation) | Kamako, Shin-ichiro (2003-**-**) | |||
| Identified by | Hoshina, Ryo | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2018 Mar] | |||
|
Culture condition (Preculture condition) |
Medium:
CYT
;
HUT
Temperature: 20 C Light intensity: 4-10 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | rbcL ( AB260899 ) , 28S rRNA ( AB437257 ) , psaA ( AB260913 ) , 18S-ITS1-5.8S-ITS2 ( AB162912 ) , 16S rRNA ( AB208587 ) | |||
| Cell size (min - max) | 3 - 7 μm | |||
| Organization | Unicellular | |||
| Characteristics | Symbiotic (Paramecium bursaria) ; Auxotrophic (Amino acid) | |||
| Other strain no. | Other strain no. : OK1-ZK | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
|
Related strain information
(Large number of orders and same genus or species)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2169 |
Chlorella sorokiniana | Green alga | Freshwater | Starch production (Takeshita et al. 2014) |
NIES-2170
|
Chlorella vulgaris | Green alga | Starch production (Hirokawa et al. 1982) ; Genome decoded strain (Wakasugi et al. 1997) | |
NIES-642
|
Chlorella vulgaris | Green alga | Freshwater (River water) | |
NIES-227
|
Chlorella vulgaris | Green alga | ||
|
NIES-2540 |
Chlorella variabilis | Green alga | (Paramecium bursaria F36) | Symbiotic (Paramecium bursaria) ; Auxotrophic (Amino acid) |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-641 |
Chlorella vulgaris | Green alga | Freshwater (River water) | |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-2285
|
Klebsormidium nitens | Freshwater | Genome decoded strain (Hori et al. 2014) | |
NIES-1419
|
Pseudoscourfieldia marina | Marine (Seawater) | ||
|
NIES-2582 |
Prasinoderma coloniale | Marine (Seawater) | Planktonic | |
NIES-303
|
Penium margaritaceum | Desmid | Freshwater (Ditch water) | |
NIES-296
|
Mesostigma viride | Freshwater (Lake water) | Genome decoded strain (Lemieux, C. et al. 2000, Turmel, M. et al. 2002b, Liang et al. 2020) | |
| Reference |
|---|
|
Hoshina, R. & Imamura, N.
2009
Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification.
Mol. Biol. Evol.,
26,
1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing Strain(s): 2541 PubMed: 19279084 DOI: 10.1093/molbev/msp044 Hoshina, R., Kamako, S.-I., Imamura, N. 2004 Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan. Plant Biol., 6, 447-453. Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2004-820888 Hoshina, R., Kato, Y., Kamako, S., Imamura, N. 2005 Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg. Plant Biol., 7, 526-532. Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2005-865912 Kato, Y., Ueno, S., Imamura, N. 2006 Studies on the nitrogen utilization of endosymbiotic algae isolated from Japanese Paramecium bursaria. Plant Sci., 170, 481-486. Keywords: Endosymbiont; Paramecium bursaria; Nitrogen utilization; Chlorella Strain(s): 227, 2540, 2541 DOI: 10.1016/j.plantsci.2005.09.018 Quispe, C. F., Sonderman, O., Khasin, M., Riekhof, W. R., Van Etten, J. L., Nickerson, K. W. 2016 Comparative genomics, transcriptomics, and physiology distinguish symbiotic from free-living Chlorella strains. Algal Res., 18, 332-340. Keywords: Chlorella variabilis; Alga-paramecium symbiosis; Algal nitrogen metabolism; Amino acid transporters Strain(s): 2540, 2541 DOI: 10.1016/j.algal.2016.06.001 Kunugi, M., Satoh. S., Ihara. K., Shibata. K., Yamagishi. Y., Kogame. K., Obokata. J., Takabayashi. A., Tanaka. A. 2016 Evolution of green plants accompanied changes in light-harvesting systems. Plant Cell Physiol., 57, 1231-1243. Keywords: Evolution; Green algae; Land plants; Light adaptation; Photosystem Strain(s): 254, 1419, 2541, 2582 PubMed: 27057002 DOI: 10.1093/pcp/pcw071 Hamada, M., Schröder, K., Bathia, J., Kürn, U., Fraune, S., Khalturina, M., Khalturin, K., Shinzato, C., Satoh, N., Bosch, T. C.G. 2018 Metabolic co-dependence drives the evolutionary ancient Hydra-Chlorella symbiosis. eLife, 7, e35122 (article ID). Keywords: Chlorella; Hydra; evolutionary biology; genome; nitrogen metabolism; symbiosis Strain(s): 2166, 2235, 2541 PubMed: 29848439 DOI: 10.7554/eLife.35122 Yokono, M., Takabayashi, A., Kishimoto, J., Fujita, T., Iwai, M., Murakami, A., Akimoto, S., Tanaka, A. 2019 The PSI-PSII megacomplex in green plants. Plant Cell Physiol., 60, 1098–1108. Keywords: Energy transfer; Nonphotochemical quenching; Photosystem Strain(s): 144, 296, 303, 2285, 2541 PubMed: 30753722 DOI: 10.1093/pcp/pcz026 Ogbonna, C., N. & Chioke, O. J. 2018 Effects of moringa extracts on sedimentation and growth of Chlorella variabilis. Int. J. Appl. Nat. Sci., 7, 131-138. Keywords: Cell Growth; Cell Sedimentation; Chlorella variabilis; Harvesting of Microalgae; Moringa Oliefera; Seed Extract Strain(s): 2541 Agarkova, I. V., Lane, L. C., Dunigan, D. D., Quispe, C. F., Duncan, G. A., Milrot, E., Minsky, A., Esmael, A., Ghosh, J. F., Van Etten, J. L. 2021 Identification of a chlorovirus PBCV-1 protein involved in degrading the host cell wall during virus infection. Viruses-Basel, 13, 782 (article ID). Keywords: Chlorella; Phycodnaviridae; chlorovirus; PBCV-1; algal lytic activity; cell wall degrading activity; alginate-like lyase Strain(s): 2540, 2541 PubMed: 33924931 DOI: 10.3390/v13050782 |
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