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Strain Data
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| Strain number | NIES-2567 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Chlorophyceae | |||
| Scientific name | Volvulina compacta Nozaki | |||
| Synonym | ||||
| Former name | ||||
| Common name | Green alga | |||
| Locality (Date of collection) | Lake Tsukui, Midori-ku, Sagamihara, Kanagawa, Japan (2002-05-30) | |||
| Latitude / Longitude | 35.60138888 / 139.23055555 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < Nakada, Takashi | |||
| Isolator (Date of isolation) | Nakada, Takashi (2002-05-30) | |||
| Identified by | Nakada, Takashi | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2017 Dec] | |||
|
Culture condition (Preculture condition) |
Medium:
MG
Temperature: 20 C Light intensity: 9 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
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| Gene information | 18S rRNA ( LC086365 ) , atpB ( AB593420 ) , psaA ( AB593421 ) , psaB ( AB593422 ) , rbcL ( AB593419 ) , psbC ( AB593423 ) | |||
| Cell size (min - max) | ||||
| Organization | Colonial; Flagellate | |||
| Characteristics | Phototaxis | |||
| Other strain no. | Other strain no. : TN-0205-2-Pn-1 | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-545 |
Volvulina steinii | Green alga | Freshwater (Paddy soil) | Phototaxis ; Heterothallic ; Mating type (−) ; Crosses with NIES-546 |
|
NIES-893 |
Volvulina boldii | Green alga | Phototaxis ; Heterothallic ; Isogamous ; Mating type (+) | |
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NIES-895 |
Volvulina pringsheimii | Green alga | Terrestrial (Rock) | Phototaxis ; Heterothallic ; Isogamous |
|
NIES-546 |
Volvulina steinii | Green alga | Freshwater (Paddy soil) | Phototaxis ; Heterothallic ; Mating type (+) ; Crosses with NIES-545 |
|
NIES-582 |
Volvulina compacta | Green alga | Freshwater (Paddy soil) | Phototaxis ; Heterothallic ; Mating type (+) ; Crosses with NIES-583 |
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Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
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||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-896 |
Volvulina steinii | Green alga | Freshwater (Ditch mud) | Mixotrophic ; Osmotrophic ; Phototaxis ; Heterothallic ; Isogamous |
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Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-879 |
Vitreochlamys fluviatilis | Green alga | Freshwater (Pond water) | Phototaxis |
|
NIES-4246 |
Chlamydomonas sp. | Green alga | Freshwater (Paddy soil) | Phototaxis |
|
NIES-3383 |
Colemanosphaera charkowiensis | Green alga | Freshwater (Pond water) | Planktonic |
NIES-571
|
Tetrabaena socialis | Green alga | Freshwater (Pond sediment) | Phototaxis ; Homothallic ; Isogamous ; Genome decoded strain (Featherston et al. 2017) |
|
NIES-569 |
Gonium pectorale | Green alga | Freshwater (Paddy soil) | Phototaxis ; Heterothallic ; Isogamous ; Mating type (+) ; Crosses with NIES-570 |
| Reference |
|---|
|
Nakada, T., Tomita, M., Nozaki, H.
2010
Volvulina compacta (Volvocaceae, Chlorophyceae), new to Japan, and its phylogenic position.
J. Jpn. Bot.,
85,
364-369.
Keywords: molecular phylogeny; taxonomy; Volvocaceae; Volvulina compacta Strain(s): 2567 Nakada, T., Ito, T., Tomita, M. 2016 18S ribosomal RNA gene phylogeny of a colonial volvocalean lineage (Tetrabanaceae-Goniaceae-Volvocaceae, Volvocales, Chlorophyceae) and its close relatives. J. Jpn. Bot., 91, 345-354. Keywords: 18S rRNA; colonial; green algae; molecular phylogeny; unicellular; Volvocales Strain(s): 418, 456, 460, 474, 541, 544, 545, 564, 566, 571, 654, 666, 721, 725, 728, 735, 737, 867, 877, 879, 880, 881, 882, 883, 1362, 2242, 2246, 2266, 2567, 3388, 4126 Sausen, N., Malavasi, V., Melkonian, M. 2018 Molecular phylogeny, systematics and revision of the type species of Lobomonas, L. francei,(Volvocales, Chlorophyta) and closely related taxa. J. Phycol., 54, 198-214. Keywords: crystalline glycoprotein lattice; CWClade; ITS2; L. panduriformis; rbcL; Reinhardtinia; scanning electron microscopy; SSU nrRNA Strain(s): 257, 418, 456, 474, 541, 566, 577, 666, 735, 879, 880, 882, 883, 1362, 1708, 1858, 2567, 3923 PubMed: 29278416 DOI: 10.1111/jpy.12615 Nakada, T., Tsuchida, Y., Tomita, M. 2019 Improved taxon sampling and multigene phylogeny of unicellular chlamydomonads closely related to the colonial volvocalean lineage Tetrabaenaceae-Goniaceae-Volvocaceae (Volvocales, Chlorophyceae). Mol. Phylogenet. Evol., 130 1-8. Keywords: Alga; Chlamydomonas; Colony evolution; Multigene phylogeny; Vitreochlamys; Zoosporangium Strain(s): 418, 437, 456, 460, 474, 541, 544, 545, 564, 566, 569, 571, 577, 654, 666, 721, 725, 728, 735, 737, 867, 879, 880, 882, 883, 887, 1362, 1858, 2462, 2567, 3383, 3388, 4241, 4242, 4243, 4244, 4245, 4246, 4247, 4248, 4249, 4250, 4251, 4252, 4253, 4254, 4255, 4256 PubMed: 30266459 DOI: 10.1016/j.ympev.2018.09.013 |
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