Strain Data

Strain number		NIES-2690
Phylum		Heterokontophyta
Class		Pelagophyceae
Scientific name		Pelagomonas calceolata R.A.Andersen & G.W.Saunders
Synonym
Former name
Common name
Locality (Date of collection)		Red Sea (Gulf of Aqaba) (Depth -100m), Somalia (1993-01-01)
Latitude / Longitude		10.3333 / 52.15
Habitat (Isolation source)		Marine (Seawater)
History		< RCC (2010);
Isolator (Date of isolation)		Simon, N. (Re-isolation) < Veldhuis, M. (1993-01-01)
Identified by		Simon, N.
State of strain		Cryopreservation; Unialgal; Clonal; Non-axenic
Culture condition (Preculture condition)		Medium: ESM Temperature: 20 C Light intensity: 19-24 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 1 M
Gene information		16S rRNA ( AY702140 )
Cell size (min - max)		- 3 μm
Organization		Unicellular; Flagellate
Characteristics		Planktonic
Other strain no.		Other collection strain no. : RCC103; CCMP1865 Other strain no. : REDSEA2C
Remarks		Cryopreserved
Movie

Related strain information (Large number of orders and same genus or species)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-2689	Pelagomonas calceolata		Marine (Seawater)	Planktonic
NIES-3689	Pelagomonas calceolata		Marine (Seawater)
NIES-2691	Pelagomonas calceolata		Marine (Seawater)	Planktonic
NIES-3391	Pelagomonas calceolata		Marine (Seawater)
NIES-1003	Pelagomonas calceolata		Marine	Planktonic

Related strain information (Used in same reference)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-2841	Skeletonema japonicum	Centric diatom	Marine (Seawater)	Red tide (Yamada et al. 2010) ; Planktonic
NIES-377	Chaetoceros socialis	Centric diatom	Marine (Seawater)
NIES-1349	Achnanthes kuwaitensis	Pennate diatom	Marine (A polyethylene bag on a beach)
NIES-705	Chroomonas placoidea		Marine	Authentic strain
NIES-274	Cryptomonas ovata		Freshwater (Pond water)

Reference
Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C. 2009 Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnol. Oceanogr., 54, 823-836. Strain(s): 2690 DOI: 10.4319/lo.2009.54.3.0823 Fuller, N. J., Campbell, C., Allen, D. J., Pitt, F. D., Le Gall, F., Vaulot, D., Scanlan, D. J. 2006 Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquat. Microb. Ecol., 43, 79-93. Keywords: Photosynthetic picoeukaryotes; Plastid 16S rRNA; Arabian Sea; PCR Strain(s): 2586, 2588, 2589, 2672, 2673, 2687, 2690, 2693 DOI: 10.3354/ame043079 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 DOI: 10.60369/microresys.33.1_19 Garcia, N. S., Sexton, J., Riggins, T., Brown, J., Lomas, M. W., Martiny, A.C. 2018 High variability in cellular stoichiometry of carbon, nitrogen, and phosphorus within classes of marine eukaryotic phytoplankton under sufficient nutrient conditions. Front. Microbiol., 9, 543 (article ID). Strain(s): 2690 PubMed: 29636735 DOI: 10.3389/fmicb.2018.00543

Reference

Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C. 2009 Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnol. Oceanogr., 54, 823-836.
Strain(s): 2690
DOI: 10.4319/lo.2009.54.3.0823

Fuller, N. J., Campbell, C., Allen, D. J., Pitt, F. D., Le Gall, F., Vaulot, D., Scanlan, D. J. 2006 Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquat. Microb. Ecol., 43, 79-93.
Keywords: Photosynthetic picoeukaryotes; Plastid 16S rRNA; Arabian Sea; PCR
Strain(s): 2586, 2588, 2589, 2672, 2673, 2687, 2690, 2693
DOI: 10.3354/ame043079

Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29.
Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae
Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691
DOI: 10.60369/microresys.33.1_19

Garcia, N. S., Sexton, J., Riggins, T., Brown, J., Lomas, M. W., Martiny, A.C. 2018 High variability in cellular stoichiometry of carbon, nitrogen, and phosphorus within classes of marine eukaryotic phytoplankton under sufficient nutrient conditions. Front. Microbiol., 9, 543 (article ID).
Strain(s): 2690
PubMed: 29636735
DOI: 10.3389/fmicb.2018.00543

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