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Strain Data
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| Strain number | NIES-2844 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Skeletonema tropicum Cleve | |||
| Synonym | ||||
| Former name | ||||
| Common name | Centric diatom | |||
| Locality (Date of collection) | Dokai Bay, Kitakyushu, Fukuoka, Japan (2008-10-07) | |||
| Latitude / Longitude | 33.88388888 / 130.78722222 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Yamada, Machiko | |||
| Isolator (Date of isolation) | Yamada, Machiko (2008-10-07) | |||
| Identified by | Yamada, Machiko | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
ESM
Temperature: 20 C Light intensity: 12 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 21 D |
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| Gene information | 28S rRNA ( AB572810 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular | |||
| Characteristics | Red tide (Yamada et al. 2010) ; Planktonic | |||
| Other strain no. | Other strain no. : FDK202 | |||
| Remarks | ||||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-16
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Sediment) | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2537 |
Skeletonema tropicum | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
NIES-323
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
NIES-324
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Test strain (Khanam et al. 2017) ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2838 |
Skeletonema costatum | Centric diatom | Marine (Seawater) | Red tide (Yamada et al. 2010) ; Planktonic |
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Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2839 |
Skeletonema dohrnii | Centric diatom | Marine (Seawater) | Red tide (Yamada et al. 2010) ; Planktonic |
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NIES-2841 |
Skeletonema japonicum | Centric diatom | Marine (Seawater) | Red tide (Yamada et al. 2010) ; Planktonic |
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Related strain information
(Used in same reference)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2718 |
Craticula molestiformis | Pennate diatom | Freshwater (Stone) | Test strain for AGP etc. (Ishihara, S. et al. 2006) |
NIES-1353
|
Sellaphora seminulum | Pennate diatom | Freshwater (Pool sediment) | Epilithic |
|
NIES-282 |
Cryptomonas tetrapyrenoidosa | Freshwater (Pond water) | Live food (Liu et al. 2016) | |
NIES-1874
|
Chrysoculter rhomboideus | Marine (Seawater) | Planktonic ; Authentic strain (Nakayama et al. 2005) | |
|
NIES-2332 |
Rhodomonas sp. | Marine (Sediment) | Genome decoded strain (Suzuki et al. 2022) | |
| Reference |
|---|
|
Yamada, M., Katsuki, E., Otsubo, M., Kawaguchi, M., Ichimi, K., Keriyama, H., Tada, K., Harrison, P. J.
2010
Species diversity of the genus Skeltonema (Bacillariophyceae) in the Industrial Harbor Dokai Bay, Japan.
J. Oceanogr.,
66,
755-771.
Keywords: Skeletonema; species diversity; isolation characteristics; Dokai Bay; LSU rDNA; SSU rDNA; SEM Strain(s): 2837, 2838, 2839, 2841, 2842, 2843, 2844 DOI: 10.1007/s10872-010-0062-4 Kaeriyama, H., Katsuki, E., Otsubo, M., Yamada, K., Ichimi, K., Tada, K., Harrison, P. J. 2011 Effects of temperature and irradiance on growth of strains belonging to seven Skeletonema species isolated from Dokai Bay, southern Japan. Eur. J. Phycol., 46, 113-124. Keywords: Dokai Bay; irradiance; physiology; Skeletonema species; specific growth rate; temperature Strain(s): 2837, 2838, 2839, 2841, 2842, 2843, 2844 DOI: 10.1080/09670262.2011.565128 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 DOI: 10.60369/microresys.33.1_19 |
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