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Strain Data
| Strain number | NIES-2887 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Prochlorococcus sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria ; Picoplankton | |||
| Locality (Date of collection) | Atlantic Ocean (Gulf Stream) (Depth -135m) (1993-07-15) | |||
| Latitude / Longitude | 37.08 / | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < RCC (2013); | |||
| Isolator (Date of isolation) | Moore, L. R. (1993-07-15) | |||
| Identified by | ||||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
PRO-99
Temperature: 20 C Light intensity: 3 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 21 D |
|||
| Gene information | Whole-genome ( BX548175 ) | |||
| Cell size (min - max) | - 1 μm | |||
| Organization | Unicellular; Non-flagellate | |||
| Characteristics | Picoplankton ; Clade: Low Light - LLIV ; Genome decoded strain (Rocap et al. 2013) | |||
| Other strain no. |
Other collection strain no. : RCC407
Other strain no. : MIT9313 |
|||
| Remarks | Unstable | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2881 |
Prochlorococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Clade: Low Light - LLI |
NIES-2884
|
Prochlorococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Clade: High Light - HLII |
|
NIES-2885 |
Prochlorococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Clade: High Light - HLI |
|
NIES-2886 |
Prochlorococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Clade: High Light - HLII |
|
NIES-2888 |
Prochlorococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Clade: High Light (to be checked, probably HLII) |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2086 |
Prochlorococcus marinus | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton |
NIES-2087
|
Prochlorococcus marinus | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Genome decoded strain |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2880 |
Prochlorococcus marinus | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; Clade: Low Light - LLI |
| Reference |
|---|
|
Dufresne, A., Garczarek, L., Partensky, F.
2005
Accelerated evolution associated with genome reduction in a free-living prokaryote.
Genome Biol.,
6,
R14 (article ID).
Strain(s): 2880, 2887 PubMed: 15693943 DOI: 10.1186/gb-2005-6-2-r14 Bibby, T. S., Mary, I., Nield, J., Partensky, F., Barber, J. 2003 Low-light-adapted Prochlorococcus species possess specific antennae for each photosystem. Nature, 424, 1051-1054. Strain(s): 2880, 2887 PubMed: 12944966 DOI: 10.1038/nature01933 El Alaoui, S., Diez, J., Toribio, F., Gómez-Baena, G., Dufresne, A., García-Fernández, J. M. 2003 Glutamine synthetase from the marine cyanobacteria Prochlorococcus spp.; characterization, phylogeny and response to nutrient limitation. Environ. Microbiol., 5, 412-423. Strain(s): 2880, 2887 PubMed: 12713467 DOI: 10.1046/j.1462-2920.2003.00433.x Moore, L. R., Rocap, G., Chisholm, S. W. 1998 Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes. Nature, 393, 464-467. Strain(s): 2880, 2887 PubMed: 9624000 DOI: 10.1038/30965 Rocap, G., Larimer, F. W., Lamerdin, J., Malfatti, S., Chain, P., Ahlgren, N. A., Arellano, A., Coleman, M., Hauser, L., Hess, W. R., Johnson, Z. I., Land, M., Lindell, D., Post, A. F., Regala, W., Shah, M., Shaw, S. L., Steglich, C., Sullivan, M. B., Ting, C. S., Tolonen, A., Webb, E. A., Zinser, E. R., Chisholm, S. W. 2003 Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation. Nature, 424, 1042-1047. Strain(s): 2880, 2887 PubMed: 12917642 DOI: 10.1038/nature01947 Mary, I., Tu, C.-J., Grossman, A., Vaulot, D. 2004 Effects of high light on transcripts of stress-associated genes for the cyanobacteria Synechocystis sp. PCC 6803 and Prochlorococcus MED4 and MIT9313. Microbiol., 150, 1271-1281. Strain(s): 2887 Isaji, Y., Yoshikawa, C., Ogawa, N. O., Matsumoto, K., Makabe, A., Toyoda, S., Ishikawa, N. F., Ogawa, H., Saito, H., Honda, M. C., Ohkouchi, N. 2022 Nitrogen sources for phytoplankton in the Eastern Indian Ocean determined from δ15N of chlorophyll a and divinylchlorophyll a. Geochem. Geophys. Geosyst., 23, e2021GC010057 (article ID). Strain(s): 2086, 2885, 2887 DOI: 10.1029/2021GC010057 |
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