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Strain Data
| Strain number | NIES-3369 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bolidophyceae | |||
| Scientific name | Triparma sp. | |||
| Synonym | ||||
| Former name | Bolidomonas sp. | |||
| Common name | ||||
| Locality (Date of collection) | North Sea (Depth -10m), France (2007-07-06) | |||
| Latitude / Longitude | 49.32 / | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < RCC (2013); | |||
| Isolator (Date of isolation) | Foulon, E; S. Masquelier, S. (2007-07-06) | |||
| Identified by | Vaulot, Daniel (Identified by DNA analysis at RCC) | |||
| State of strain | Subculture; Unialgal; Non-clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
ESM
Temperature: 15 C Light intensity: 24-35 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | 16S rRNA ( LN735273 ) , 18S rRNA ( KF422625 ) , ITS-1-5.8S-ITS2 ( KR998395 ) , rbcL ( KR998420 ) , nadH1 ( KR998411 ) | |||
| Cell size (min - max) | - 2 μm | |||
| Organization | ||||
| Characteristics | Non-siliceous flagellated stage[2018 May] | |||
| Other strain no. |
Other collection strain no. : RCC1657
Other strain no. : MICROVIR 3K_0 |
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| Remarks | Fragile species to transportation stresses; Read and agree "How to order 4.1" | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2682 |
Triparma pacifica | Marine (Seawater) | Planktonic ; Authentic strain (Ichinomiya et al. 2016) ; Non-siliceous flagellated stage[2018 May] | |
|
NIES-3700 |
Triparma verrucosa | Marine (Seawater) | Genome decoded strain (Ban et al. 2023) ; Siliceous, Non-flagellated stage[2018 May] | |
NIES-2565
|
Triparma laevis | Marine (Seawater) | Genome decoded strain (Kuwata et al. 2020;（ Ban et al. 2023) ; Siliceous, Non-flagellated stage[2018 May] | |
|
NIES-3370 |
Triparma eleuthera | Marine (Seawater) | Non-siliceous flagellated stage[2018 May] | |
|
NIES-3371 |
Triparma eleuthera | Marine (Seawater) | Planktonic ; Authentic strain (Ichinomiya et al. 2016) ; Non-siliceous flagellated stage[2018 May] | |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3699 |
Triparma laevis | Marine (Seawater) | Genome decoded strain (Ban et al. 2023) ; Siliceous, Non-flagellated stage[2018 May] | |
|
NIES-3701 |
Triparma strigata | Marine (Seawater) | Genome decoded strain (Ban et al. 2023) ; Siliceous, Non-flagellated stage[2018 May] | |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2753 |
Pycnococcus provasolii | Marine (Seawater) | ||
|
NIES-2700 |
Gephyrocapsa oceanica | Coccolithophore | Marine (Seawater) | Planktonic |
NIES-2695
|
Calcidiscus leptoporus | Coccolithophore | Marine (Seawater) | Planktonic |
|
NIES-2758 |
Chloroparvula japonica | Marine (Seawater) | Genome decoded strain (Turmel et al. 2019) ; Authentic strain (Lopes dos Santos et al. 2017) ; Clade VIIB2 | |
|
NIES-2699 |
Gephyrocapsa oceanica | Coccolithophore | Marine (Seawater) | Planktonic |
| Reference |
|---|
|
Guillou, L.
2011
Characterization of the Parmales: much more than the resolution of a taxonomic enigma.
J. Phycol.,
47,
2-4.
Strain(s): 2682, 3369, 3370, 3371 DOI: 10.1111/j.1529-8817.2010.00951.x del Campo, J., Sieracki, M.E., Molestina, R., Keeling, P., Massana, R., Ruiz-Trillo, I. 2014 The others: our biased perspective of eukaryotic genomes. Trends Ecol. Evol., 29, 252-259. Strain(s): 1000, 2582, 2584, 2587, 2590, 2670, 2673, 2691, 2693, 2694, 2695, 2696, 2697, 2699, 2700, 2707, 2751, 2753, 2755, 2756, 2758, 2761, 3369, 3370, 3371 PubMed: 24726347 DOI: 10.1016/j.tree.2014.03.006 Ichinomiya, M., Lopes dos Santos, A., Gourvil, P., Yoshikawa, S., Kamiya, M., Ohki, K., Audic, S., De Vargas, C., Noël, M. H., Vaulot, D., Kuwata, A. 2016 Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms. ISME J., 10, 2419-2434. Strain(s): 2565, 2682, 3369, 3370, 3371, 3699, 3700, 3701 PubMed: 27003244 DOI: 10.1038/ismej.2016.38 Kuwata, A., Yamada, K., Ichinomiya, M., Yoshikawa, S., Tragin, M., Vaulot, D., Lopes dos Santos, A. 2018 Bolidophyceae, a sister picoplanktonic group of diatoms – a review. Front. Mar. Sci., 5, 370 (article ID). Keywords: bolidophyceae; parmales; diatoms; genetic diversity; mitosis; geographical distribution; seasonal dynamics and silicification Strain(s): 2565, 2682, 3369, 3370, 3371, 3699, 3700, 3701 DOI: 10.3389/fmars.2018.00370 |
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