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Strain Data
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| Strain number | NIES-223 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Skeletonema marinoi-dohrnii complex | |||
| Synonym | ||||
| Former name | Skeletonema costatum (Greville) Cleve | |||
| Common name | Centric diatom | |||
| Locality (Date of collection) | Shodo Isl., Kagawa, Japan (1979-07-12) | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Marine | |||
| History | < KAGAWA | |||
| Isolator (Date of isolation) | Yuki, Katsuhisa | |||
| Identified by | ||||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
f/2
Temperature: 15 C Light intensity: 8 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
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| Gene information | 18S rRNA ( AB488609 ) , 28S rRNA ( DQ396507 ) , CO1 ( AB706229 ) | |||
| Cell size (min - max) | - 5 μm | |||
| Organization | Unicellular | |||
| Characteristics | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade | |||
| Other strain no. | Other strain no. : KGW-26 | |||
| Remarks | ||||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-16
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Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Sediment) | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2537 |
Skeletonema tropicum | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
NIES-323
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
NIES-324
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Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Test strain (Khanam et al. 2017) ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2838 |
Skeletonema costatum | Centric diatom | Marine (Seawater) | Red tide (Yamada et al. 2010) ; Planktonic |
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Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3698 |
Skeletonema sp. | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
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Related strain information
(Used in same reference)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-2144
|
Poterioochromonas malhamensis | Freshwater (Stone) | Mixotrophic ; Phagotrophic | |
|
NIES-2533 |
Skeletonema dohrnii | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
|
NIES-702 |
Rhodomonas falcata | Marine | Authentic strain | |
|
NIES-2839 |
Skeletonema dohrnii | Centric diatom | Marine (Seawater) | Red tide (Yamada et al. 2010) ; Planktonic |
|
NIES-1007 |
Synura petersenii | Freshwater (River water) | ||
| Reference |
|---|
|
Kooistra, W. H. C. F., Sarno, D., Balzano, S., Gu, H., Andersen, R. A., Zingone, A.
2008
Global diversity and biogeography of Skeletonema species (Bacillariophyta).
Protist,
159,
177-193.
Keywords: biogeography; cryptic species; distribution; LSU rDNA; phytoplankton; Skeletonema costatum Strain(s): 16, 17, 223, 323, 324 PubMed: 18042429 DOI: 10.1016/j.protis.2007.09.004 Yamada, M., Otsubo, M., Tsutsumi, Y., Mizota, C., Nakamura, Y., Takahashi, K., Iwataki M. 2017 Utility of mitochondrial-encoded cytochrome c oxidase I gene for phylogenetic analysis and species identification of the planktonic diatom genus Skeletonema. Phycol. Res., 65, 217-225. Keywords: cox1; genetic marker; LSU rDNA; phylogenetictree; species delimitation; SSU rDNA Strain(s): 16, 223, 2837, 2838, 2842 DOI: 10.1111/pre.12179 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 DOI: 10.60369/microresys.33.1_19 |
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