Strain Data

Strain number		NIES-3585
Phylum		Cyanophyta
Class		Cyanophyceae
Scientific name		Nodularia sp.
Synonym
Former name
Common name		Blue-green alga ; Cyanobacteria
Locality (Date of collection)		Yatsu Tidal Flat, Narashino, Chiba, Japan (2011-09-**)
Latitude / Longitude		35.676 / 140.006
Habitat (Isolation source)		Marine (Tidal flat sediment)
History		< Katayama, Mitsunori
Isolator (Date of isolation)		Katayama, Mitsunori (2011--)
Identified by		Katayama, Mitsunori
State of strain		Cryopreservation; Unialgal; Clonal; Axenic
Culture condition (Preculture condition)		Medium: Modified BG-11₀ (agar) Temperature: 25 C Light intensity: 13-16 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 2 M
Gene information		Whole-genome ( BDUB01000000 )
Cell size (min - max)
Organization
Characteristics		Nitrogen fixation　 (aerobic condition, Modified BG-11₀ medium, N-Free medium) ; Benthic ; Epiphytic ; Genome decoded strain
Other strain no.		Other strain no. : CIT044
Remarks		Cryopreserved; Axenic
Movie

Related strain information (Used in same reference)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-4106	Pelatocladus sp.	Blue-green alga ; Cyanobacteria	Terrestrial (Soil)	Nitrogen fixation ; Attached ; Genome decoded strain
NIES-2665	Umezakia ovalisporum	Blue-green alga ; Cyanobacteria	Freshwater (Water)	Nitrogen fixation　 (aerobic condition, Modified BG-11₀ medium, N-Free medium)
NIES-19	Anabaena cylindrica	Blue-green alga ; Cyanobacteria
NIES-2111	Nostoc sp.	Blue-green alga ; Cyanobacteria	Terrestrial	Drought tolerance ; Genome decoded strain
NIES-25	Desmonostoc sp.	Blue-green alga ; Cyanobacteria		Genome decoded strain

Reference
Popin, R. V., Delbaje, E., Abreu, V.A.C., Rigonato, J., Dörr, F.A., Pinto, E., Sivonen, K., Fiore, M.F. 2020 Genomic and metabolomic analyses of natural products in Nodularia spumigena isolated from a shrimp culture pond. Toxins, 12, 141 (article ID). Keywords: cyanobacteria; gene cluster; mass spectrometry; cyanotoxins; terpenes; water quality Strain(s): 3585 PubMed: 32106513 DOI: 10.3390/toxins12030141 Gharaie Fathabad, S., Arumanayagam, A. S., Tabatabai, B., Chen, H., Lu, J., Sitther, V. 2019 Augmenting Fremyella diplosiphon cellular lipid content and unsaturated fatty acid methyl esters via sterol desaturase gene overexpression. Appl. Biochem. Biotechnol., 189, 1127-1140. Keywords: Alkane; Biofuel; Cyanobacteria; Sterol desaturase; Transcript abundance Strain(s): 2100, 2107, 3585 PubMed: 31168708 DOI: 10.1007/s12010-019-03055-5 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 McGregor, G. B., Sendall, B. C., Niiyama, Y., Tuji, A., Willis, A. 2023 Chrysosporum ovalisporum is synonymous with the true-branching cyanobacterium Umezakia natans (Nostocales/Aphanizomenonaceae). J. Phycol., 59, 326-341. Strain(s): 21, 26, 2665, 3585, 4103, 4490 PubMed: 36680435 DOI: 10.1111/jpy.13317 Mehjabin, J. J., Phan, C.-S., Okino, T. 2024 Noducyclamides A1-A4, B1, and B2 from the Cyanobacterium Nodularia sp. NIES-3585. J. Nat. Prod., 87, 984-993. Strain(s): 3585 PubMed: 38587271 DOI: 10.1021/acs.jnatprod.3c01272

Reference

Popin, R. V., Delbaje, E., Abreu, V.A.C., Rigonato, J., Dörr, F.A., Pinto, E., Sivonen, K., Fiore, M.F. 2020 Genomic and metabolomic analyses of natural products in Nodularia spumigena isolated from a shrimp culture pond. Toxins, 12, 141 (article ID).
Keywords: cyanobacteria; gene cluster; mass spectrometry; cyanotoxins; terpenes; water quality
Strain(s): 3585
PubMed: 32106513
DOI: 10.3390/toxins12030141

Gharaie Fathabad, S., Arumanayagam, A. S., Tabatabai, B., Chen, H., Lu, J., Sitther, V. 2019 Augmenting Fremyella diplosiphon cellular lipid content and unsaturated fatty acid methyl esters via sterol desaturase gene overexpression. Appl. Biochem. Biotechnol., 189, 1127-1140.
Keywords: Alkane; Biofuel; Cyanobacteria; Sterol desaturase; Transcript abundance
Strain(s): 2100, 2107, 3585
PubMed: 31168708
DOI: 10.1007/s12010-019-03055-5

Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID).
Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy
Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106
PubMed: 34677568
DOI: 10.1093/dnares/dsab024

McGregor, G. B., Sendall, B. C., Niiyama, Y., Tuji, A., Willis, A. 2023 Chrysosporum ovalisporum is synonymous with the true-branching cyanobacterium Umezakia natans (Nostocales/Aphanizomenonaceae). J. Phycol., 59, 326-341.
Strain(s): 21, 26, 2665, 3585, 4103, 4490
PubMed: 36680435
DOI: 10.1111/jpy.13317

Mehjabin, J. J., Phan, C.-S., Okino, T. 2024 Noducyclamides A1-A4, B1, and B2 from the Cyanobacterium Nodularia sp. NIES-3585. J. Nat. Prod., 87, 984-993.
Strain(s): 3585
PubMed: 38587271
DOI: 10.1021/acs.jnatprod.3c01272

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