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Strain Data
| Strain number | NIES-3698 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Skeletonema sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Centric diatom | |||
| Locality (Date of collection) | Tokyo Bay, Aomi, Koto-ku, Tokyo, Japan (2011-06-**) | |||
| Latitude / Longitude | 35.6180 / 139.7729 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Yokoyama, Akiko | |||
| Isolator (Date of isolation) | Yokoyama, Akiko (2011-06-**) | |||
| Identified by | Yokoyama, Akiko | |||
| State of strain | Subculture; Clonal; Axenic[2024 Dec] | |||
|
Culture condition (Preculture condition) |
Medium:
f/2
Temperature: 20 C Light intensity: 4-5 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 14 D |
|||
| Gene information | 18S rRNA ( LC009480 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular | |||
| Characteristics | Red tide ; Planktonic | |||
| Other strain no. | Other strain no. : DA123 | |||
| Remarks | Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-16
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Sediment) | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2537 |
Skeletonema tropicum | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
NIES-323
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
NIES-324
|
Skeletonema marinoi-dohrnii complex | Centric diatom | Marine (Seawater) | Red tide ; Test strain (Khanam et al. 2017) ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade |
|
NIES-2838 |
Skeletonema costatum | Centric diatom | Marine (Seawater) | Red tide (Yamada et al. 2010) ; Planktonic |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2535 |
Skeletonema japonicum | Centric diatom | Marine (Seawater) | Red tide ; Planktonic |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-281
|
Cryptomonas curvata | Freshwater (Pond water) | Genome decoded strain (Suzuki et al. 2022) | |
|
NIES-3697 |
Abollifer globosa | Marine (Seawater) | Heterotrophic ; Authentic strain (Shiratori et al. 2014) | |
| Reference |
|---|
|
Kashiyama Y., Yokoyama A., Kinoshita Y., Shoji S., Miyashiya H., Shiratori T., Suga H., Ishikawa K., Ishikawa A., Inouye I., Ishida K., Fujinuma D., Aoki K., Kobayashi M., Nomoto S., Mizoguchi T., Tamiaki H.
2012
Ubiquity and quantitative significance of detoxification catabolism of chlorophyll associated with protistan herbivory.
Proc. Nati. Acad. Sci. U. S. A.,
109,
17328-17335.
Keywords: phototoxicity of chlorophylls; microbial herbivory; phagocytosis; biodiversity of eukaryotes; microbial loop Strain(s): 281, 3697, 3698 PubMed: 22949677 DOI: 10.1073/pnas.1207347109 Shiratori T., Yokoyama A., Ishida K. 2014 Phylogeny, ultrastructure, and flagellar apparatus of a new marimonad flagellate Abollifer globosa sp. nov. (Imbricatea, Cercozoa). Protist, 165, 808-824. Keywords: Cercozoa; Marimonadida; heterotrophic flagellate; ultrastructure; phylogenetic analysis; flagellar apparatus Strain(s): 3697, 3698 PubMed: 25460232 DOI: 10.1016/j.protis.2014.10.003 |
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