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Strain Data
| Strain number | NIES-3710 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Chaetoceros debilis Cleve | |||
| Synonym | ||||
| Former name | ||||
| Common name | Centric diatom | |||
| Locality (Date of collection) | off Shiotsuka River, Ariake Sea, Yanagawa, Fukuoka, Japan (2002-11-21) | |||
| Latitude / Longitude | 33.080102 / 130.364592 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Kimura, Kei < Tomaru, Yuji | |||
| Isolator (Date of isolation) | Tomaru, Yuji (2002-11-22) | |||
| Identified by | Suzuki, Hidekazu; Nagumo, Tamotsu | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
mSWM-3
Temperature: 15 C Light intensity: 17 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 21 D |
|||
| Gene information | 18S rRNA ( AB847419 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular | |||
| Characteristics | Red tide ; Resting spore-forming ; The virus which infects with this diatom strain has been reported (Tomaru, Y. et al. 2008). | |||
| Other strain no. | Other strain no. : Ch48 | |||
| Remarks | ||||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3715 |
Chaetoceros tenuissimus | Centric diatom | Marine (Seawater) | Red tide ; Genome decoded strain (Hongo et al. 2021) ; The virus which infects with this diatom strain has been reported (Shirai et al. 2008). |
NIES-586
|
Chaetoceros didymus | Centric diatom | Marine (Seawater) | Red tide ; Test strain (Kohira, M.., et al. 2016) |
NIES-377
|
Chaetoceros socialis | Centric diatom | Marine (Seawater) | |
NIES-3711
|
Chaetoceros lorenzianus | Centric diatom | Marine (Seawater) | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2011). |
|
NIES-3713 |
Chaetoceros socialis | Centric diatom | Marine (Seawater) | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2009). |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3714 |
Chaetoceros tenuissimus | Centric diatom | Marine (Seawater) | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2010). |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3712 |
Chaetoceros setoensis | Centric diatom | Marine (Seawater) | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2013). |
| Reference |
|---|
|
Tomaru, Y., Shirai, Y., Suzuki, H., Nagumo, T., Nagasaki, K.
2008
Isolation and characterization of a new single-stranded DNA virus infecting the cosmopolitan marine diatom Chaetoceros debilis.
Aquat. Microb. Ecol.,
50,
103-112.
Keywords: Diatom; Virus; Chaetoceros; DNA; Viral ecology Strain(s): 3710, 3713 DOI: 10.3354/ame01170 Tomaru, Y., Toyoda, K., Suzuki, H., Nagumo, T., Kimura, K., Takao, Y. 2013 New single-stranded DNA virus with a unique genomic structure that infects marine diatom Chaetoceros setoensis. Sci Rep, 3, 3337 (article ID). Strain(s): 3710, 3711, 3712, 3713 PubMed: 24275766 DOI: 10.1038/srep03337 |
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