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Strain Data
| Strain number | NIES-3716 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Chaetoceros sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Centric diatom | |||
| Locality (Date of collection) | Tachigami-Ura, Ago Bay, Shima, Mie, Japan (2007-07-04) | |||
| Latitude / Longitude | 34.295123 / 136.828294 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Kimura, Kei < Tomaru, Yuji | |||
| Isolator (Date of isolation) | Tomaru, Yuji (2007-07-05) | |||
| Identified by | Tomaru, Yuji | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
mSWM-3
Temperature: 15 C Light intensity: 9-11 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 21 D |
|||
| Gene information | 18S rRNA ( AB847415 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular | |||
| Characteristics | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2012). | |||
| Other strain no. | Other strain no. : TG07-C28 | |||
| Remarks | ||||
| Movie | ||||
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Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3714 |
Chaetoceros tenuissimus | Centric diatom | Marine (Seawater) | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2010). |
|
NIES-3717 |
Chaetoceros sp. | Centric diatom | Marine (Seawater) | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2013). |
| Reference |
|---|
|
Toyoda, K., Kimura, K., Hata, N., Nakayama, N., Nagasaki, K., Tomaru, Y.
2012
Isolation and characterization of a single-stranded DNA virus infecting the marine planktonic diatom Chaetoceros sp. (strain TG07-C28).
Plankton Benthos Res.,
7,
20-28.
Strain(s): 3716 DOI: 10.3800/pbr.7.20 Kimura, K. & Tomaru, Y. 2017 Effects of temperature and salinity on diatom cell lysis by DNA and RNA viruses. Aquat. Microb. Ecol., 79, 79-83. Keywords: Water temperature; Water salinity; Host-virus interactions; Diatom lysis Strain(s): 3714, 3716 DOI: 10.3354/ame01818 Tomaru, Y., Kimura, K., Yamaguchi, H. 2014 Temperature alters algicidal activity of DNA and RNA viruses infecting Chaetoceros tenuissimus. Aquat. Microb. Ecol., 73, 171-183. Keywords: Diatom; CtenDNAV; CtenRNAV; Virus; Niche partitioning Strain(s): 3716, 3717 DOI: 10.3354/ame01713 |
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