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Strain Data
| Strain number | NIES-3974 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Calothrix sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Nakabusa Hot Spring, Azumino, Nagano, Japan (2012-10-13) | |||
| Latitude / Longitude | 36.394381 / 137.747200 | |||
| Habitat (Isolation source) | Hot spring (Stream Sediment) | |||
| History | < Hirose, Yuu | |||
| Isolator (Date of isolation) | Hirose, Yuu (2012-12-01) | |||
| Identified by | Hirose, Yuu | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Feb] | |||
|
Culture condition (Preculture condition) |
Medium:
BG-11
Temperature: 37 C Light intensity: 9-10 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
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| Gene information | Whole-genome ( AP018254 ) , cytochrome P450 CYP120A4 gene ( OR14583 ) | |||
| Cell size (min - max) | ||||
| Organization | Filamentous | |||
| Characteristics | Genome decoded strain | |||
| Other strain no. | Other strain no. : NBH1 | |||
| Remarks | Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-4105 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Terrestrial (Concrete fence) | Nitrogen fixation ; Attached ; Genome decoded strain |
|
NIES-2098 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain | |
|
NIES-2099 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) | |
|
NIES-2100 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain | |
|
NIES-2101 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Terrestrial | Drought tolerance ; Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain (Zhu et al. 2017) |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-22 |
Calothrix brevissima | Blue-green alga ; Cyanobacteria | Freshwater (Soil) | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Chromatic adaptation |
NIES-267
|
Calothrix parasitica | Blue-green alga ; Cyanobacteria | Marine (Seaweed) | Endophyte in Nemalion (Rhodophyceae) ; Genome decoded strain |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-4070 |
Nostoc commune | Blue-green alga ; Cyanobacteria | Terrestrial (Nostoc commune) | Drought tolerance ; Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) |
NIES-4102
|
Pleurocapsa sp. | Blue-green alga ; Cyanobacteria | Terrestrial | Genome decoded strain |
NIES-39
|
Arthrospira platensis | Blue-green alga ; Cyanobacteria | Salt water | Autotrophic ; Genome decoded strain (Fujisawa et al. 2010) ; Hydrogen evolution ; Contains good quality of proteins |
|
NIES-932 |
Raphidiopsis curvata | Blue-green alga ; Cyanobacteria | Freshwater (Pond water) | Cyanobacterial water bloom (aoko) ; Planktonic ; Gram negative ; Genome decoded strain |
NIES-44
|
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater | Cyanobacterial water bloom (aoko) ; ST1 (Tanabe et al. 2007) ; Genome decoded strain (Okano et al. 2015) |
| Reference |
|---|
|
MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G.
2020
Origin and evolution of carboxysome positioning systems in cyanobacteria.
Mol. Biol. Evol.,
37,
1434–1451.
Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Antonaru, L. A., Cardona, T., Larkum, A. W. D., Nürnberg, D. J. 2020 Global distribution of a chlorophyll f cyanobacterial marker. ISME J., 14, 2275–2287. Strain(s): 267, 593, 3974 PubMed: 32457503 DOI: 10.1038/s41396-020-0670-y Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 Arsın, S., Delbaje, E., Jokela, J., Wahlsten, M., Farrar, Z. M., Permi, P., Fewer, D. 2023 A plastic biosynthetic pathway for the production of structurally distinct microbial sunscreens. ACS Chem. Biol., 18, 1959–1967. Strain(s): 25, 73, 267, 2100, 2107, 2109, 2111, 2130, 3755, 3756, 3757, 3974, 4073, 4102, 4103, 4105, 4106 PubMed: 37603862 DOI: 10.1021/acschembio.3c00112 Nowruzi, B., Hutarova, L., Vešelenyiova, D., Metcalf, J. S. 2024 Characterization of Neowestiellopsis persica A1387 (Hapalosiphonaceae) based on the cpcA, psbA, rpoC1, nifH and nifD gene sequences. BMC Ecol. Evol., 24, 57 (article ID). Keywords: Cyanobacteria; Phylogenetic analysis; Neowestiellopsis persica, cpcA Strain(s): 21, 22, 23, 25, 50, 73, 267, 592, 2098, 2100, 2107, 3275, 3754, 3756, 3974, 4073, 4074, 4101, 4103, 4106 PubMed: 38711016 DOI: 10.1186/s12862-024-02244-z |
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