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Strain Data
| Strain number | NIES-4075 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Tolypothrix sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | near Ise-jingu Shrine, Ise, Mie, Japan (2009-**-**) | |||
| Latitude / Longitude | 34.486858 / 136.707076 | |||
| Habitat (Isolation source) | Terrestrial (The lichen on bark) | |||
| History | < Katoh, Hiroshi | |||
| Isolator (Date of isolation) | Katoh, Hiroshi (2012-**-**) | |||
| Identified by | Katoh, Hiroshi | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2017 May] | |||
|
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 C Light intensity: 6-10 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
|||
| Gene information | Whole-genome ( BDUC00000000 ) , 16S rRNA ( LC497426 ) | |||
| Cell size (min - max) | ||||
| Organization | ||||
| Characteristics | Drought tolerance ; Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain | |||
| Other strain no. | Other strain no. : MK-01 | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
|
Related strain information
(Large number of orders and same genus or species)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-2571 |
Tolypothrix sp. | Blue-green alga ; Cyanobacteria | (Soil) | |
|
NIES-37 |
Tolypothrix tenuis | Blue-green alga ; Cyanobacteria | Heterotrophic ; Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Chromatic adaptation ; Material for studying on phycobilin production ; Material for studying on phycobilin production ; Genome decoded strain | |
NIES-515
|
Tolypothrix sp. | Blue-green alga ; Cyanobacteria | Freshwater (River water) | |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-3974 |
Calothrix sp. | Blue-green alga ; Cyanobacteria | Hot spring (Stream Sediment) | Genome decoded strain |
|
NIES-25 |
Desmonostoc sp. | Blue-green alga ; Cyanobacteria | Genome decoded strain | |
|
NIES-2135 |
Leptolyngbya boryana | Blue-green alga ; Cyanobacteria | Genome decoded strain | |
NIES-267
|
Calothrix parasitica | Blue-green alga ; Cyanobacteria | Marine (Seaweed) | Endophyte in Nemalion (Rhodophyceae) ; Genome decoded strain |
|
NIES-3585 |
Nodularia sp. | Blue-green alga ; Cyanobacteria | Marine (Tidal flat sediment) | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Benthic ; Epiphytic ; Genome decoded strain |
| Reference |
|---|
|
MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G.
2020
Origin and evolution of carboxysome positioning systems in cyanobacteria.
Mol. Biol. Evol.,
37,
1434–1451.
Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 Tamre, E. & Fournier, G. P. 2022 Inferred ancestry of scytonemin biosynthesis proteins in cyanobacteria indicates a response to Paleoproterozoic oxygenation. Geobiology, 20, 764–775. Keywords: Bayesian phylogenetics; cyanobacteria; Paleoproterozoic; photoprotection; scytonemin; UVA radiation Strain(s): 21, 23, 25, 26, 267, 2108, 2111, 3756, 4073, 4074, 4075, 4103 PubMed: 35851984 DOI: 10.1111/gbi.12514 |
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