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Strain Data
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| Strain number | NIES-296 | |||
|---|---|---|---|---|
| Phylum | Streptophyta | |||
| Class | Mesostigmatophyceae | |||
| Scientific name | Mesostigma viride Lauterborn | |||
| Synonym | ||||
| Former name | ||||
| Common name | ||||
| Locality (Date of collection) | Yoshino Park, Mitsukaido, Ibaraki, Japan (1985-07-03) | |||
| Latitude / Longitude | 36.076428 / 140.001716 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < Suda, Shoichiro | |||
| Isolator (Date of isolation) | Suda, Shoichiro (1985-07-08) | |||
| Identified by | Inouye, Isao | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Jan] | |||
|
Culture condition (Preculture condition) |
Medium:
C
Temperature: 20 C Light intensity: 24-39 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 25 D |
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| Gene information | Whole-genome ( RPFO01000000 ) , Mitochondria genome ( AF353999 ) , Plastid genome ( AF166114 ) , Root cap protein 1-8 mRNAs ( DQ287936-DQ287943 ) , ftsZ ( AB673433 ) | |||
| Cell size (min - max) | - 18 μm | |||
| Organization | Unicellular; Flagellate | |||
| Characteristics | Genome decoded strain (Lemieux, C. et al. 2000, Turmel, M. et al. 2002b, Liang et al. 2020) | |||
| Other strain no. | Other strain no. : KY-14 | |||
| Remarks | Unstable; Fragile species to transportation stresses; Read and agree "How to order 4.1"; Axenic | |||
| Movie | https://www.youtube.com/watch?v=En3oZr0DE64&list=PLFTJlLsZcVbiJY3ygYAPKeVOfDdOh9UEW&index=11 | |||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-995 |
Mesostigma viride | Freshwater (Pond water) | Phototaxis ; Cells larger than normal strains | |
|
NIES-476 |
Mesostigma viride | Freshwater (Pond sediment) | Heterothallic ; Mating type (−) | |
|
NIES-475 |
Mesostigma viride | Freshwater (Pond sediment) | Heterothallic ; Mating type (+) | |
|
NIES-477 |
Mesostigma viride | Freshwater (Pond sediment) | Heterothallic ; Mating type (−) ; Genome decoded strain (Glass, S. E. et al. 2023) | |
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Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-160
|
Chlorokybus riethii | Freshwater (Soil) | ||
|
NIES-3377 |
Cyanidioschyzon merolae | Red alga | Hot spring (Water) | Planktonic ; Thermophilic (opt. 40-45℃（) ; Acidophilic (pH 1.5-2.4) ; Phototaxic ; Genome decoded strain |
|
NIES-486 |
Nephroselmis viridis | Marine (Sediment) | Red tide ; Authentic strain (Yamaguchi et al. 2011) | |
NIES-722
|
Eudorina cylindrica | Green alga | Freshwater (Soil) | Phototaxis ; Heterothallic |
NIES-483
|
Nephroselmis olivacea | Freshwater (Pond sediment) | Heterothallic ; Mating type (+) | |
| Reference |
|---|
|
Iwamoto, K. & Ikawa, T.
2000
A novel glycolate oxidase requiring flavin mononucleotide as the cofactor in the prasinophycean alga Mesostigma viride.
Plant Cell Physiol.,
41,
988-991.
Keywords: flavin mononucleotide (FMN)-requiring enzyme; glycolate metabolism; glycolate oxidase; glycolate-oxidizing enzyme; Mesostigma viride; Prasinophyceae Strain(s): 296 PubMed: 11038060 DOI: 10.1093/pcp/pcd020 Lemieux, C., Otis, C., Turmel, M. 2000 Ancestral chloroplast in Mesostigma viride reveals an early branch of green plant evolution. Nature, 403, 649-652. Strain(s): 296 PubMed: 10688199 DOI: 10.1038/35001059 Turmel, M., Otis, C., Lemieux, C. 2002b The complete mitochondrial DNA sequence of Mesostigma viride identifies this green alga as the earliest green plant divergence and predicts a highly compact mitochondrial genome in the ancestor of all green plants. Mol. Biol. Evol., 19, 24-38. Keywords: green aglae; Mesostigma viride;mitochondrial DNA; group I introns; group II introns; trans-splicing Strain(s): 296 PubMed: 11752187 DOI: 10.1093/oxfordjournals.molbev.a003979 Hamana, K., Aizaki T., Arai, E., Saito, A., Uchikata, K., Ohnishi, H. 2004 Distribution of norspermidine s a cellular polyamine within micro green algae including non-photosynthetic achlorophyllous Polytoma, Polytomella, Prototheca and Helicosporidium. J. Gen. Appl. Microbiol., 50, 289-295. Keywords: Chlorophyta; green alga; Helicosporidium; norspermidine; polyamine; Polytoma; Polytomella; Prototheca Strain(s): 18, 251, 254, 255, 296, 329, 483, 486, 536 Turmel, M., Ehara, M., Otis, C., Lemieux, C. 2002a Phylogenetic relationships among streptophytes as inferred from chloroplast small and large subunit rRNA gene sequences. J. Phycol., 38, 364-375. Keywords: Charophyceae; chloroplast rRNA genes; introns; land plants; phylogeny; Streptophyta Strain(s): 296, 484 DOI: 10.1046/j.1529-8817.2002.01163.x Yoshii, Y., Takaichi, S., Maoka, T., Inouye, I. 2003 Photosynthetic pigment composition in the primitive green alga Mesostigma viride (Prasinophyceae): phylogenetic and evolutionary implications. J. Phycol., 39, 570-576. Keywords: abscisic acid; carotenoid; Mesostigma; neoxanthin; siphonaxanthin; siphonaxanthin ester Strain(s): 296, 475, 476, 477 DOI: 10.1046/j.1529-8817.2003.02098.x Nedelcu, A. M., Borza, T., Lee, R. W. 2006 A land-plant specific multigene family in the unicellular Mesostigma argues for its close relationship to Streptophyta. Mol. Biol. Evol., 23, 1011-1015. Keywords: Mesostigma viride; land plant evolution; Streptophyta; histogenetic meristem; gene family Strain(s): 296 PubMed: 16476689 DOI: 10.1093/molbev/msj108 Hua, JM., Smith, D. R., Borza, T., Lee, R. W. 2012 Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas. Protist, 163, 105-115. Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate Strain(s): 296, 476 PubMed: 21621456 DOI: 10.1016/j.protis.2011.04.003 Laflamme, M., Lee, R. W. 2003 Mitochondrial genome conformation among CW-group Chlorophycean algae. J. Phycol., 39, 213-220. Keywords: Chlamydomonas; Chlorophyceae; gel electrophoresis; mitochondrial DNA conformation; phylogeny Strain(s): 296, 484 DOI: 10.1046/j.1529-8817.2003.02045.x Hamana, K., Niitsu, M., Hayashi, H. 2013 Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae. J. Gen. Appl. Micobiol., 59, 313-319. Keywords: green alga; homospermidine; polyamine; thermospermine Strain(s): 18, 151, 160, 255, 296, 306, 360, 363, 640, 722, 836, 1409, 1410, 1411, 1419, 1837, 2164, 2199, 3374 PubMed: 24005181 DOI: 10.2323/jgam.59.313 Miyagishima, S., Suzuki, K., Okazaki, K., Kabeya, Y. 2012 Expression of the nucleus-encoded chloroplast division genes and proteins regulated by the algal cell cycle. Mol. Biol. Evol., 29, 2957-2970. Keywords: cell cycle; chloroplast division; endosymbiosis; endosymbiotic gene transfer Strain(s): 296, 484, 547, 1332, 2170, 3377, 4696 PubMed: 22490821 DOI: 10.1093/molbev/mss102 Schwender, J., Gemünden, C., Lichtenthaler, H. K. 2001 Chlorophyta exclusively use the 1-deoxyxylulose 5-phosphate/2-C-methylerythritol 4-phosphate pathway for the biosynthesis of isoprenoids. Planta, 212, 416-423. Keywords: Charophyta; 1-Deoxy-D-xylulose; Green alga; Isopentenyl diphosphate; Isoprenoid biosynthesis; Mevalonate Strain(s): 296 PubMed: 11289606 DOI: 10.1007/s004250000409 Hua, J., Lee, R.W. 2012 Factors affecting codon bias in the mitochondrial genomes of the Streptophyte Mesostigma viride and the Chlorophyte Chlamydomonas reinhardtii. J. Eucaryot. Microbiol., 59, 287-289. Keywords: Green algae; mutation; selection; synonymous codon usage Strain(s): 296 PubMed: 22340021 DOI: 10.1111/j.1550-7408.2011.00613.x Yang, A., Narechania, A., Kim, E. 2016 Rickettsial endosymbiont in the “early‐diverging” streptophyte green alga Mesostigma viride. J. Phycol., 52, 219-229. Keywords: endosymbiosis; green algae; Mesostigma ; Rickettsiales; symbiosis; transcriptome Strain(s): 296, 475, 995 PubMed: 27037587 DOI: 10.1111/jpy.12385 Yokono, M., Takabayashi, A., Kishimoto, J., Fujita, T., Iwai, M., Murakami, A., Akimoto, S., Tanaka, A. 2019 The PSI-PSII megacomplex in green plants. Plant Cell Physiol., 60, 1098–1108. Keywords: Energy transfer; Nonphotochemical quenching; Photosystem Strain(s): 144, 296, 303, 2285, 2541 PubMed: 30753722 DOI: 10.1093/pcp/pcz026 Liang, Z., Geng, Y., Ji, C., Du, H., Wong, C. E., Zhang, Q., Zhang, Y., Zhang, P., Riaz, A., Chachar, S., Ding, Y., Wen, J., Wu, Y., Wang, M., Zheng, H., Wu, Y., Demko, V., Shen, L., Han, X., Zhang, P., Gu, X., Yu, H. 2020 Mesostigma viride genome and transcriptome provide insights into the origin and evolution of Streptophyta. Adv. Sci., 7, 1901850 (article ID). Keywords: Mesostigma viride; evolution; green algae; multicellularity; Streptophyta Strain(s): 296 PubMed: 31921561 DOI: 10.1002/advs.201901850 Aso, M., Matsumae, R., Tanaka, A., Tanaka, R., Takabayashi, A. 2021 Unique peripheral antennas in the photosystems of the streptophyte alga Mesostigma viride. Plant Cell Physiol., 62, 436–446. Keywords: Green algae; Iso-seq; Mesostigma viride; Native-PAGE; Photosystem Strain(s): 296 PubMed: 33416834 DOI: 10.1093/pcp/pcaa172 Bock, N. A., Charvet, S., Burns, J., Gyaltshen, Y., Rozenberg, A., Duhamel ,S., Kim, E. 2021 Experimental identification and in silico prediction of bacterivory in green algae. ISME J., 15, 1987-2000. Strain(s): 254, 296, 626, 995 PubMed: 33649548 DOI: 10.1038/s41396-021-00899-w Davison, H. R., Pilgrim, J., Wybouw, N., Parker, J., Pirro, S., Hunter-Barnett, S., Campbell, P. M., Blow, F., Darby, A. C., Hurst, G. D. D., Siozios, S. 2022 Genomic diversity across the Rickettsia and ‘Candidatus Megaira’ genera and proposal of genus status for the Torix group. Nat. Commun., 13, 2630 (article ID). Strain(s): 296, 425 PubMed: 35551207 DOI: 10.1038/s41467-022-30385-6 |
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