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Strain Data
| Strain number | NIES-4550 | |||
|---|---|---|---|---|
| Phylum | Streptophyta | |||
| Class | Zygnematophyceae | |||
| Scientific name | Closterium peracerosum-strigosum-littorale complex | |||
| Synonym | ||||
| Former name | ||||
| Common name | Desmid | |||
| Locality (Date of collection) | The rice terraces of Negoshioki, Nagano, Nagano, Japan (2007-07-28) | |||
| Latitude / Longitude | 36.495278 / 137.964083 | |||
| Habitat (Isolation source) | Freshwater (Vegetative cell germinated from a zygospore) | |||
| History | < Tsuchikane, Yuki | |||
| Isolator (Date of isolation) | Tsuchikane, Yuki (2008-08-05) | |||
| Identified by | Tsuchikane, Yuki | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
CA
Temperature: 20 C Light intensity: 14-17 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | Whole-genome ( CANJKZ000000000 ) , 18S rRNA ( LC740473 ) | |||
| Cell size (min - max) | 137 - 203 μm | |||
| Organization | Unicellular | |||
| Characteristics | Homothallic ; Isogamou ; Genome decoded strain (Kawaguchi et al. 2023) | |||
| Other strain no. | Other strain no. : Naga37s-1 | |||
| Remarks | ||||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-64 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Lake water) | Heterothallic: Mating type (−) ; Mating group II B |
|
NIES-65 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Lake water) | Heterothallic: Mating type (+) ; Mating group II B |
|
NIES-52 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Paddy water) | Heterothallic: Mating type (−) ; Mating group II A |
|
NIES-67 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Pool soil) | Heterothallic: Mating type (+) ; Mating group I B ; Genome decoded strain (Sekimoto et al. 2023) |
NIES-68
|
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Pool soil) | Heterothallic: Mating type (−) ; Mating group I B ; Genome decoded strain (Sekimoto et al. 2023) |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-228
|
Closterium ehrenbergii | Desmid | Freshwater (Paddy soil) | Heterothallic ; Mating type (+) ; Mating group B ; Crossing with NIES-229 |
NIES-229
|
Closterium ehrenbergii | Desmid | Freshwater (Paddy soil) | Heterothallic ; Mating type (−) ; Mating group B ; Crossing with NIES-228 |
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-4552 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Paddy water) | Homothallic ; Isogamou |
|
NIES-4549 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Paddy water) | Homothallic ; Isogamou |
|
NIES-4584 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Water) | Heterothallic ; Isogamous ; Mating type (−) ; Mating group II A |
|
NIES-4321 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Lake water) | Heterothallic ; Isogamous ; Mating group II-C ; Mating type (−) ; Crossing with NIES-4322 and NIES-261 |
|
NIES-4582 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (River water) | Heterothallic: Isogamous ; Mating type (−) ; Mating group II B (Tsuchikane et al. 2012) |
| Reference |
|---|
|
Kawaguchi, Y. W., Tsuchikane, Y., Tanaka, K., Taji, T., Suzuki, Y., Toyoda, A., Ito, M., Watano, Y., Nishiyama, T., Sekimoto, H., Tsuchimatsu, T.
2023
Extensive copy number variation explains genome size variation in the unicellular Zygnematophycean alga, Closterium peracerosum–strigosum–littorale complex.
Genome Biol. Evol.,
15,
evad115 (article ID).
Keywords: gene duplication; dosage compensation; copy number variation; green algae Strain(s): 53, 54, 58, 59, 62, 63, 64, 65, 68, 261, 2666, 4319, 4320, 4321, 4548, 4550, 4551, 4552, 4581, 4582, 4583, 4584 PubMed: 37348049 DOI: 10.1093/gbe/evad115 Tsuchikane, Y., Watanabe, M., Kawaguchi, Y. W., Uehara, K., Nishiyama, T., Sekimoto, H., Tsuchimatsu, T. 2024 Diversity of genome size and chromosome number in homothallic and heterothallic strains of the Closterium peracerosum–strigosum–littorale complex (Desmidiales, Zygnematophyceae, Streptophyta). J. Phycol., 60, 654-667. Keywords: Closterium; flow cytometry; genome size; heterothallism; homothallism; sexual reproduction Strain(s): 52, 53, 54, 58, 59, 60, 61, 62, 63, 64, 65, 67, 68, 261, 2666, 4319, 4320, 4321, 4322, 4548, 4549, 4550, 4551, 4552, 4581, 4582, 4583, 4584 PubMed: 38678594 DOI: 10.1111/jpy.13457 |
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