Strain Data

Strain number		NIES-413
Phylum		Heterokontophyta
Class		Bacillariophyceae
Scientific name		Achnanthidium minutissimum (Kützing) Czarnecki
Synonym		Achnanthes minutissima Kützing 1833; Achnanthidium lanceolatum f. minutissima (Kützing) Tömösvary 1879; Cocconeis minutissima (Kützing) Schönfeldt 1907; Microneis minutissima (Kützing) Meister 1912
Former name
Common name		Pennate diatom
Locality (Date of collection)		Miyata River, Ibaraki, Japan (1987-02-25)
Latitude / Longitude
Habitat (Isolation source)		Freshwater (River water)
History		< Kasai, Fumie
Isolator (Date of isolation)		Kasai, Fumie (1987-03-05)
Identified by		Takamura, Noriko
State of strain		Subculture; Unialgal; Non-clonal; Non-axenic
Culture condition (Preculture condition)		Medium: CSi Temperature: 15 C Light intensity: 9-11 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 3 M
Gene information		18S rRNA ( LC143219 )
Cell size (min - max)
Organization		Unicellular
Characteristics
Other strain no.		Other strain no. : 1st-2-8
Remarks
Movie

Related strain information (Large number of orders and same genus or species)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-71	Achnanthidium minutissimum	Pennate diatom	Freshwater (River water)	Test strain for AGP etc. (Ishihara, S. et al. 2006;（ Nagai, T., 2016)
NIES-407	Achnanthidium minutissimum	Pennate diatom	Freshwater (River water)
NIES-414	Achnanthidium minutissimum	Pennate diatom	Freshwater (River water)
NIES-372	Achnanthidium minutissimum	Pennate diatom	Freshwater (Plant)
NIES-408	Achnanthidium minutissimum	Pennate diatom	Freshwater (River water)

Related strain information (Whose relevance due to simultaneous purchases and other information is inferred by AI)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-1350	Achnanthidium minutissimum	Pennate diatom	Freshwater (River stone)	Benthic ; Epilithic

Related strain information (Used in same reference)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-2773	Pavlova sp.		Marine (Seawater)
NIES-558	Chattonella marina		Marine (Seawater)	Red tide
NIES-225	Tabellaria flocculosa	Pennate diatom	Freshwater (Bog water)
NIES-324	Skeletonema marinoi-dohrnii complex	Centric diatom	Marine (Seawater)	Red tide ; Test strain (Khanam et al. 2017) ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade
NIES-1399	Pavlova sp.		Marine (Water)

Reference
Takamura, N., Kasai, F., Watanabe, M. M. 1988 Differences in the tolerant level of benthic algae to heavy metal - The effects of Cu, Cd, and Zn on the photosynthesis. Res. Rep. Natl. Inst. Environ. Stud., No. 114, 223-232 (in Japanese with English summary). Strain(s): 71, 305, 329, 411, 412, 413, 434, 504, 531, 538, 641, 642, 662 Takamura, N., Kasai, F., Watanabe, M. M. 1989 Effects of Cu, Cd and Zn on photosynthesis of freshwater benthic algae. J. Appl. Phycol., 1, 39-52. Keywords: heavy metal; photosynthesis; algae; tolerance Strain(s): 71, 305, 329, 407, 408, 409, 410, 411, 412, 413, 414, 416, 433, 434, 454, 461, 465, 466, 467, 479, 481, 487, 503, 504, 505, 506, 507, 509, 510, 515, 529, 530, 531, 532, 536, 537, 538, 539, 540, 620, 639, 640, 641, 642, 659, 660, 661, 662 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 DOI: 10.60369/microresys.33.1_19 Miao, M., Li, Z., Hwang, E.-A., Kim, H.-K., Lee, H., Kim, B.-H. 2020 Two new benthic diatoms of the genus Achnanthidium (Bacillariophyceae) from the Hangang River, Korea. Diversity-Basel, 12, 285 (article ID). Keywords: Achnanthidium; freshwater; molecular phylogeny; morphology; rbcL; SSU; taxonomy Strain(s): 372, 407, 410, 411, 412, 413, 414 DOI: 10.3390/d12070285

Reference

Takamura, N., Kasai, F., Watanabe, M. M. 1988 Differences in the tolerant level of benthic algae to heavy metal - The effects of Cu, Cd, and Zn on the photosynthesis. Res. Rep. Natl. Inst. Environ. Stud., No. 114, 223-232 (in Japanese with English summary).
Strain(s): 71, 305, 329, 411, 412, 413, 434, 504, 531, 538, 641, 642, 662

Takamura, N., Kasai, F., Watanabe, M. M. 1989 Effects of Cu, Cd and Zn on photosynthesis of freshwater benthic algae. J. Appl. Phycol., 1, 39-52.
Keywords: heavy metal; photosynthesis; algae; tolerance
Strain(s): 71, 305, 329, 407, 408, 409, 410, 411, 412, 413, 414, 416, 433, 434, 454, 461, 465, 466, 467, 479, 481, 487, 503, 504, 505, 506, 507, 509, 510, 515, 529, 530, 531, 532, 536, 537, 538, 539, 540, 620, 639, 640, 641, 642, 659, 660, 661, 662

Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29.
Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae
Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691
DOI: 10.60369/microresys.33.1_19

Miao, M., Li, Z., Hwang, E.-A., Kim, H.-K., Lee, H., Kim, B.-H. 2020 Two new benthic diatoms of the genus Achnanthidium (Bacillariophyceae) from the Hangang River, Korea. Diversity-Basel, 12, 285 (article ID).
Keywords: Achnanthidium; freshwater; molecular phylogeny; morphology; rbcL; SSU; taxonomy
Strain(s): 372, 407, 410, 411, 412, 413, 414
DOI: 10.3390/d12070285

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