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Strain Data
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| Strain number | NIES-96 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Chlorophyceae | |||
| Scientific name | Desmodesmus sp. | |||
| Synonym | ||||
| Former name | Formerly identified as Scenedesmus quadricauda, re-identified at NIES by DNA analysis | |||
| Common name | Green alga | |||
| Locality (Date of collection) | Lake Shoji, Yamanashi, Japan (1981-08-31) | |||
| Latitude / Longitude | 35.4890967699 / 138.608906585 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < TAC; | |||
| Isolator (Date of isolation) | Watanabe, Masayuki | |||
| Identified by | Re-identified by NIES | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic | |||
|
Culture condition (Preculture condition) |
Medium:
C
Temperature: 20 (25) C Light intensity: 4-10 (14-16) µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M (14 D) |
|||
| Gene information | atpB ( AB084305 ) , rbcL ( AB084332 ) , psaB ( AB084339 ) , CO1 ( AB011524 ) | |||
| Cell size (min - max) | - 16 μm | |||
| Organization | ||||
| Characteristics | ||||
| Other strain no. | Other strain no. : TAC 51-3B (TAN-51-3B) | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-4418 |
Desmodesmus sp. | Green alga | Freshwater (Reservoir water) | |
|
NIES-97 |
Desmodesmus serratus | Green alga | Freshwater (Lake water) | |
|
NIES-685 |
Desmodesmus abundans | Green alga | Authentic strain of Chlorella fusca Shihira & R.W.Krauss (Shihira & R.W.Krauss 1965) | |
|
NIES-4282 |
Desmodesmus subspicatus | Green alga | Freshwater | Test strain for ecotoxicity testing (DIN 38412;( Teil 33 (DEV L 33) ; ISO 8692 (1989)) |
|
NIES-797 |
Desmodesmus subspicatus | Green alga | Freshwater (Pond water) | Test strain (Nagai, T., 2016) ; Herbicide (simetryn) susceptible |
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Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-802 |
Desmodesmus subspicatus | Green alga | Freshwater (Pond water) | Herbicide (simetryn) tolerant |
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Related strain information
(Used in same reference)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-464 |
Gloeomonas lateperforata | Green alga | Freshwater (Pond water) | |
|
NIES-187 |
Closterium spinosporum | Desmid | Freshwater (Rush field soil) | Homothallic |
|
NIES-688 |
Graesiella emersonii | Green alga | Freshwater | |
|
NIES-339 |
Closterium selenastrum | Desmid | Freshwater (Rush field soil) | Homothallic |
|
NIES-56 |
Closterium peracerosum-strigosum-littorale complex | Desmid | Freshwater (Paddy water) | Heterothallic: Mating type (−) ; Mating group II A |
| Reference |
|---|
|
Hayashi-Ishimaru, Y., Ohama, T., Kawatsu, Y., Nakamura, K., Osawa, S.
1996
UAG is a sense codon in several chlorophycean mitochondria.
Curr. Genet.,
30,
29-33.
Keywords: deviant genetic code; COXI; Chlorophyceaen mitochondria; release factor Strain(s): 96, 209, 227, 415 PubMed: 8662206 DOI: 10.1007/s002940050096 Mori, F., Erata, M., Watanabe, M. M. 2002 Cryopreservation of cyanobacteria and green algae in the NIES-Collection. Microbiol. Cult. Coll., 18, 45-55. Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection Strain(s): 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 78, 79, 80, 81, 87, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 119, 120, 122, 123, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 138, 139, 144, 147, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185, 186, 187, 188, 189, 191, 192, 193, 194, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 224, 226, 227, 228, 229, 230, 231, 232, 241, 242, 243, 244, 245, 246, 248, 257, 259, 261, 263, 266, 267, 268, 287, 288, 289, 290, 294, 295, 297, 298, 299, 300, 301, 302, 303, 305, 306, 308, 309, 310, 312, 313, 329, 334, 337, 338, 339, 340, 341, 342, 349, 351, 359, 360, 361, 362, 375, 378, 379, 380, 382, 384, 385, 390, 394, 396, 397, 398, 415, 416, 418, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 437, 438, 439, 440, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 464, 468, 469, 474, 478, 479, 480, 481, 503, 504, 505, 506, 507, 509, 510, 512, 514, 515, 522, 523, 524, 527, 528, 529, 530, 531, 532, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 592, 593, 594, 595, 596, 597, 598, 604, 610, 628, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 672, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729 Nakai, S., Yamane, S., Hosomi, M. 2000 Algal growth inhibition effects of Myriophyllum spicatum-releasing four allelopathic polyphenols. J. Jpn. Soc. Wat. Environ., 23, 726-730 (in Japanese with English summary). Keywords: allelochemical; polyphenol; algae; concentration-dependent synergistic growth inhibition; autoxidation Strain(s): 35, 71, 87, 96, 512 Nozaki, H., Onishi, K., Morita, E. 2002 Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). J. Mol. Evol., 55, 414-430. Keywords: ATP synthase β-subunit (atpB) gene; Chloromonas; gene evolution; large subunit of Rubisco (rbcL) gene; morphological evolution; P700 chlorophyll a-apoprotein A2 (psaB) gene; pyrenoid; Volvocales Strain(s): 96, 123, 144, 213, 418, 421, 425, 428, 432, 439, 446, 447, 456, 474, 522, 564, 566, 567, 569, 571, 574, 582, 653, 732, 851, 858, 861, 875, 882, 883, 968 PubMed: 12355262 DOI: 10.1007/s00239-002-2338-9 Watanabe, K. I., Ehara, M., Inagaki, Y., Ohama, T. 1998 Distinctive origins of group I introns found in the COXI genes of three green algae. Gene, 213, 1-7. Keywords: Group I intron; Chlorella vulgaris; Scenedesmus quadricauda; Protosiphon botryoides; cytochrome c oxidase subunit I; intron homing; frameshift Strain(s): 96, 227 DOI: 10.1016/S0378-1119(98)00235-2 Yanagida, Y. 1992 An assay system for detecting the effects of weed killers, by using the green microalga Scenedesmus quadricauda [Bisyô ryokusô Scenedesmus quadricauda wo mochiita josôzai no eikyôhyôkahô nitsuite]. Report of Freshwater Fisheries Experiment Station Ibaraki Prefecture, No. 28, 124-127 (in Japanese). Strain(s): 96 Nakajima, N., Teramoto, T., Kasai, F., Sano, T., Tamaoki, M., Aono, M., Kubo, A., Kamada, H., Azumi, Y., Saji, H. 2007 Glycosylation of bisphenol A by freshwater microalgae. Chemosphere, 69, 934-941. Keywords: Metabolite; Glucoside; Galactoside; Endocrine disruptors Strain(s): 35, 94, 96, 151, 245, 424, 468, 763 PubMed: 17629547 DOI: 10.1016/j.chemosphere.2007.05.088 Furusato, E., Asaeda, T., Manatunge, J. 2004 Tolerance for prolonged darkness of three phytoplankton species, Microcystis aeruginosa (Cyanophyceae), Scenedesmus quadricauda (Chlorophyceae), and Melosira ambigua (Bacillariophyceae). Hydrobiologia, 527, 153-162. Keywords: algal bloom; artificial circulation; community succession; darkness tolerance; phytoplankton Strain(s): 96, 298 DOI: 10.1023/B:HYDR.0000043198.08168.d3 Furusato, E., Asaeda, T., Fukuwatari, T. 2001 Tolerance against prolonged darkness of three freshwater phytoplankton. J. Jpn. Soc. Wat. Environ., 1, 27-34 (in Japanese with English summary). Keywords: artificial circulation; phytoplankton; dark survival; community succession; Microcystis aeruginosa Strain(s): 96, 298 DOI: 10.2965/jswe.24.27 Oshimi, M., Fujimoto, N., Ohnishi, A., Suzuki, M., Akiba, M., Kunikane, S. 2005 Isolation of bacteria lysing musty odor producing alga Phormidium tenue and its lytic characteristics. J. Jpn. Soc. Wat. Environ., 28, 379-384 (in Japanese with English summary). Keywords: alga-lytic bacteria; musty odor; Phormidium tenue; Pseudomonas KA6 Strain(s): 96, 211, 227, 244, 298, 512, 817 DOI: 10.2965/jswe.28.379 Kobayashi, N. & Yukumoto, M. 2017 Improvement of micro algae yield by culture condition optimization. The 12th Conference on Biomass Science, 145-146 (in Japanese with English summary). Strain(s): 96 DOI: 10.20550/jiebiomassronbun.12.0_145 Gómez-Martínez, D., Bengtson, J., Nilsson, A. K., Clarke, A. K., Nilsson, R. H., Kristiansson, E., Corcoll, N. 2023 Phenotypic and transcriptomic acclimation of the green microalga Raphidocelis subcapitata to high environmental levels of the herbicide diflufenican. Sci. Total Environ., 875, 162604 (article ID). Keywords: Acclimation; Microalgae; Transcriptomics; Diflufenican; Carotenoids Strain(s): 96, 298 PubMed: 36878298 DOI: 10.1016/j.scitotenv.2023.162604 |
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