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Strain Data
| Strain number | NIES-484 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Nephroselmidophyceae | |||
| Scientific name | Nephroselmis olivacea F.Stein | |||
| Synonym | ||||
| Former name | ||||
| Common name | ||||
| Locality (Date of collection) | Tsuchiura, Ibaraki, Japan (1986-02-**) | |||
| Latitude / Longitude | 36.081096 / 140.16337 | |||
| Habitat (Isolation source) | Freshwater (Pond sediment) | |||
| History | < Suda, Shoichiro | |||
| Isolator (Date of isolation) | Suda, Shoichiro (1986-05-06) | |||
| Identified by | Suda, Shoichiro | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2017 Dec] | |||
|
Culture condition (Preculture condition) |
Medium:
AF-6
Temperature: 20 C Light intensity: 3 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 45 D |
|||
| Gene information | Plastid genome ( AF137379 ) , Mitochondrial genome ( AF110138 ) , eno ( AF348938 ) , ftsZ2 ( AB673439 ) | |||
| Cell size (min - max) | 8 - 10 μm | |||
| Organization | Unicellular; Flagellate | |||
| Characteristics | Genome decoded strain (Turmel et al. 1999a, Turmel et al. 1999b) ; Heterothallic ; Mating type (−) | |||
| Other strain no. | Other strain no. : S-N-5-8 | |||
| Remarks | Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-1418 |
Nephroselmis sp. | Marine (Seawater) | ||
|
NIES-486 |
Nephroselmis viridis | Marine (Sediment) | Red tide ; Authentic strain (Yamaguchi et al. 2011) | |
NIES-483
|
Nephroselmis olivacea | Freshwater (Pond sediment) | Heterothallic ; Mating type (+) | |
NIES-1415
|
Nephroselmis astigmatica | Marine (Sand and seawater) | Benthic | |
NIES-252
|
Nephroselmis astigmatica | Marine (Seawater) | Red tide ; Genome decoded strain (Lemieux et al. 2014) | |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-934 |
Nephroselmis spinosa | Marine (Sediment) | , Euryhaline | |
|
NIES-1416 |
Nephroselmis pyriformis | Marine (Seawater) | ||
|
Related strain information
(Used in same reference)
|
||||
|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-360
|
Oltmannsiellopsis viridis | Marine (Seawater) | Genome decoded strain (Pombert, J. F. et al. 2006a, Pombert, J. F. et al. 2006b) | |
NIES-2140
|
Porphyridium purpureum | Red alga | Color: reddish ; Genome decoded strain (Tajima et al. 2014) | |
|
NIES-293 |
Heterosigma akashiwo | Marine (Seawater) | Red tide ; Genome decoded strain (Cattolico, R. A. et al. 2008) | |
NIES-2170
|
Chlorella vulgaris | Green alga | Starch production (Hirokawa et al. 1982) ; Genome decoded strain (Wakasugi et al. 1997) | |
NIES-1332
|
Cyanidioschyzon merolae | Red alga | Hot spring (Water) | Planktonic ; Acidophilic ; Thermophilic ; Genome decoded strain |
| Reference |
|---|
|
Turmel, M., Lemieux, C., Burger, G., Lang, B. F., Otis, C., Plante, I., Gray, M. W.
1999a
The complete mitochondrial DNA sequences of Nephroselmis olivacea and Pedinomonas minor: Two radically different evolutionary patterns within green algae.
Plant Cell,
11,
1717-1729.
Strain(s): 484 PubMed: 10488238 DOI: 10.1105/tpc.11.91717 Turmel, M., Otis, C., Lemieux, C. 1999b The complete chloroplast DNA sequence of the green alga Nephroselmis olivacea: Insights into the architecture of ancestral chloroplast genomes. Proc. Nati. Acad. Sci. U. S. A., 96, 10248-10253. Strain(s): 484 PubMed: 10468594 DOI: 10.1073/pnas.96.18.10248 Turmel, M., Ehara, M., Otis, C., Lemieux, C. 2002a Phylogenetic relationships among streptophytes as inferred from chloroplast small and large subunit rRNA gene sequences. J. Phycol., 38, 364-375. Keywords: Charophyceae; chloroplast rRNA genes; introns; land plants; phylogeny; Streptophyta Strain(s): 296, 484 DOI: 10.1046/j.1529-8817.2002.01163.x Rodríguez-Salinas, E., Riveros-Rosas, H., Li, ZK., Fučíková, K., Brand JJ., Lewis, LA., González-Halphen, D. 2012 Lineage-specific fragmentation and nuclear relocation of the mitochondrial cox2 gene in chlorophycean green algae (Chlorophyta). Mol. Phylogenet. Evol., 64, 166-176. Keywords: Mitochondrial genes; Cytochrome oxidase; Chlorophyte algae; Chlorophyceae; Gene migration; Gene fragmentation Strain(s): 360, 484 PubMed: 22724135 DOI: 10.1016/j.ympev.2012.03.014 Laflamme, M., Lee, R. W. 2003 Mitochondrial genome conformation among CW-group Chlorophycean algae. J. Phycol., 39, 213-220. Keywords: Chlamydomonas; Chlorophyceae; gel electrophoresis; mitochondrial DNA conformation; phylogeny Strain(s): 296, 484 DOI: 10.1046/j.1529-8817.2003.02045.x Miyagishima, S., Suzuki, K., Okazaki, K., Kabeya, Y. 2012 Expression of the nucleus-encoded chloroplast division genes and proteins regulated by the algal cell cycle. Mol. Biol. Evol., 29, 2957-2970. Keywords: cell cycle; chloroplast division; endosymbiosis; endosymbiotic gene transfer Strain(s): 296, 484, 547, 1332, 2170, 3377, 4696 PubMed: 22490821 DOI: 10.1093/molbev/mss102 Keeling, p. J., Palmer, J. D. 2001 Lateral transfer at the gene and subgenic levels in the evolution of eukaryotic enolase. Proc. Nati. Acad. Sci. U. S. A., 98, 10745-10750. Keywords: phylogeny; protein insertions; apicomplexa; recombination Strain(s): 484 PubMed: 11526220 DOI: 10.1073/pnas.191337098 Hunsperger, H. M., Randhawa, T., Cattolico, R. A. 2015 Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. BMC Evol. Biol., 15, 16 (article ID). Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 |
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