Strain Data

Strain number		NIES-558
Phylum		Heterokontophyta
Class		Raphidophyceae
Scientific name		Chattonella marina var. marina (Subrahmanyan) Y.Hara & Chihara
Synonym		Hornellia marina Subrahmanyan 1954
Former name		Formerly identified as C. marina var. antiqua, re-identified at NIES by DNA analysis[2016 Jun]; C. antiqua (Hada) Ono
Common name
Locality (Date of collection)		Mikawa Bay, Aichi, Japan
Latitude / Longitude
Habitat (Isolation source)		Marine (Seawater)
History		< Honjo, Tsuneo
Isolator (Date of isolation)		Toriumi, Saburo
Identified by		Kawachi, Masanobu (Reidentify)
State of strain		Subculture; Unialgal; Clonal; Axenic[2018 Feb]
Culture condition (Preculture condition)		Medium: f/2 Temperature: 20 C Light intensity: 31 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 1 M
Gene information		28S rRNA ( AB217632 ) , CO1 ( AB445410 ) , trnE, trnS ( AB570012 ) , trnN, trnI, trnL, rps12 ( AB570002 ) , 18S-ITS1-5.8S-ITS2-28S ( AB286922 ) , CO2, CO1 ( AB286883 )
Cell size (min - max)
Organization		Unicellular; Flagellate
Characteristics		Red tide
Other strain no.
Remarks		Fragile species to transportation stresses; Read and agree "How to order 4.1"; Axenic
Movie

Related strain information (Large number of orders and same genus or species)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-1	Chattonella marina		Marine (Seawater)	Red tide
NIES-2	Chattonella marina		Marine	Red tide
NIES-121	Chattonella marina		Marine (Seawater)	Red tide
NIES-3	Chattonella marina		Marine (Seawater)	Red tide
NIES-603	Chattonella marina		Marine (Sediment)

Related strain information (Whose relevance due to simultaneous purchases and other information is inferred by AI)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-671	Chattonella marina		Marine (Seawater)	Red tide
NIES-113	Chattonella marina		Marine (Seawater)	Red tide
NIES-14	Chattonella marina		Marine (Sand)	Red tide
NIES-115	Chattonella marina		Marine (Seawater)	Red tide

Related strain information (Used in same reference)
Strain number	Scientific name	Common name	Habitat (Isolation source)	Characteristics
NIES-2718	Craticula molestiformis	Pennate diatom	Freshwater (Stone)	Test strain for AGP etc. (Ishihara, S. et al. 2006)
NIES-2770	Pelagomonas sp.		Marine (Seawater)
NIES-1386	Unidentified pelagophyte		Marine (Seawater)
NIES-323	Skeletonema marinoi-dohrnii complex	Centric diatom	Marine (Seawater)	Red tide ; Planktonic ; DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade
NIES-622	Botrydium granulatum		Freshwater (Lake water)

Reference
Kamikawa, R., Masuda, I., Demura, M., Oyama, K., Yoshimatsu, S., Kawachi, M., Sako, Y. 2009 Mitochondrial group II introns in the Raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer. Protist, 160, 364-375. Keywords: Chattonella; cytochrome c oxidase subunit 1 (cox1); diatoms; group II intron; lateral transfer; Raphidophyceae Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 462, 557, 558, 603, 671, 716, 849, 1303, 1975, 1976, 2391 PubMed: 19346162 DOI: 10.1016/j.protis.2009.02.003 Yamaguchi, H., Nakayama, T., Murakami, A., Inouye, I. 2010 Phylogeny and taxonomy of the Raphidophyceae (Heterokontophyta) and Chlorinimonas sublosa gen. et sp. nov., a new marine sand-dwelling raphidophyte. J. Plant Res., 123, 333-342. Keywords: Chlorinimonas sublosa gen. et sp. nov.; Phylogeny; Raphidophyceae; Taxonomy; Ultrastructure Strain(s): 558, 1380, 1808, 1809 PubMed: 19946727 DOI: 10.1007/s10265-009-0281-1 Kamikawa, R., Masuda, I., Oyama, K., Yoshimatsu, S., Sako, Y. 2007 Genetic variation in mitochondrial genes and intergenic spacer region in harmful algae Chattonella species. Fish. Sci., 73, 871-880. Keywords: Chattonella sp.; cytochrome c oxidase subunit 1 (cox1); cytochrome c oxidase subunit 2 (cox2); genetic diversity; harmful algae; mitochondria Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 557, 558, 603, 671, 849 DOI: 10.1111/j.1444-2906.2007.01408.x Hosoi-Tanabe, S., Otake, I., Sako, Y. 2006 Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family. Fish. Sci., 72, 1200-1208. Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family Strain(s): 1, 5, 86, 121, 558, 559, 603, 670 DOI: 10.1111/j.1444-2906.2006.01277.x Masuda, I., Kamikawa, R., Ueda, M., Oyama, K., Yoshimatsu, S., Inagaki, Y., Sako, Y. 2011 Mitochondrial genomes from two red tide forming raphidophycean algae Heterosigma akashiwo and Chattonella marina var. marina. Int. J. Syst. Evol. Microbiol., 10, 130-137. Keywords: Chattonella; Genome evolution; Heterosigma; Mitochondrial genome; Red tide Strain(s): 115, 121, 557, 558, 603 DOI: 10.1016/j.hal.2010.08.004 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 DOI: 10.60369/microresys.33.1_19

Reference

Kamikawa, R., Masuda, I., Demura, M., Oyama, K., Yoshimatsu, S., Kawachi, M., Sako, Y. 2009 Mitochondrial group II introns in the Raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer. Protist, 160, 364-375.
Keywords: Chattonella; cytochrome c oxidase subunit 1 (cox1); diatoms; group II intron; lateral transfer; Raphidophyceae
Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 462, 557, 558, 603, 671, 716, 849, 1303, 1975, 1976, 2391
PubMed: 19346162
DOI: 10.1016/j.protis.2009.02.003

Yamaguchi, H., Nakayama, T., Murakami, A., Inouye, I. 2010 Phylogeny and taxonomy of the Raphidophyceae (Heterokontophyta) and Chlorinimonas sublosa gen. et sp. nov., a new marine sand-dwelling raphidophyte. J. Plant Res., 123, 333-342.
Keywords: Chlorinimonas sublosa gen. et sp. nov.; Phylogeny; Raphidophyceae; Taxonomy; Ultrastructure
Strain(s): 558, 1380, 1808, 1809
PubMed: 19946727
DOI: 10.1007/s10265-009-0281-1

Kamikawa, R., Masuda, I., Oyama, K., Yoshimatsu, S., Sako, Y. 2007 Genetic variation in mitochondrial genes and intergenic spacer region in harmful algae Chattonella species. Fish. Sci., 73, 871-880.
Keywords: Chattonella sp.; cytochrome c oxidase subunit 1 (cox1); cytochrome c oxidase subunit 2 (cox2); genetic diversity; harmful algae; mitochondria
Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 557, 558, 603, 671, 849
DOI: 10.1111/j.1444-2906.2007.01408.x

Hosoi-Tanabe, S., Otake, I., Sako, Y. 2006 Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family. Fish. Sci., 72, 1200-1208.
Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family
Strain(s): 1, 5, 86, 121, 558, 559, 603, 670
DOI: 10.1111/j.1444-2906.2006.01277.x

Masuda, I., Kamikawa, R., Ueda, M., Oyama, K., Yoshimatsu, S., Inagaki, Y., Sako, Y. 2011 Mitochondrial genomes from two red tide forming raphidophycean algae Heterosigma akashiwo and Chattonella marina var. marina. Int. J. Syst. Evol. Microbiol., 10, 130-137.
Keywords: Chattonella; Genome evolution; Heterosigma; Mitochondrial genome; Red tide
Strain(s): 115, 121, 557, 558, 603
DOI: 10.1016/j.hal.2010.08.004

Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29.
Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae
Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 345, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691
DOI: 10.60369/microresys.33.1_19

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