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Strain Data
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| Strain number | NIES-945 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Synechococcus sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Lake Biwa, North Basin, Shiga, Japan (1990-09-12) | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < Takamura, Noriko | |||
| Isolator (Date of isolation) | Takamura, Noriko (1990-11-**) | |||
| Identified by | Takamura, Noriko | |||
| State of strain | Cryopreservation; Unialgal; Non-axenic[2017 Mar] | |||
|
Culture condition (Preculture condition) |
Medium:
C
Temperature: 15 C Light intensity: 9-11 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
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| Gene information | 16S rRNA ( AF216951 ) , cpcBA-IGS ( AF223428 ) , rpoC1 ( AF245124 ) , petB ( LC716313 ) | |||
| Cell size (min - max) | 1 - 2 μm | |||
| Organization | Unicellular | |||
| Characteristics | Picoplankton | |||
| Other strain no. | Other strain no. : B 1 | |||
| Remarks | Cryopreserved | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-969 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Seawater) | Picoplankton ; SC5.1, VIc (Suzuki et al. 2022) |
|
NIES-970 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sand water) | Picoplankton ; Genome decoded strain (Shimura et al. 2017) |
|
NIES-971 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sand water) | Picoplankton ; Euryhaline ; group K (Suzuki et al. 2022) |
|
NIES-972 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat seawater) | Euryhaline |
|
NIES-978 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria ; Picoplankton | Marine (Tidal flat sediment) | Euryhaline |
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Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-3277
|
Synechococcus leopoliensis | Blue-green alga ; Cyanobacteria | Genome decoded strain | |
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Related strain information
(Used in same reference)
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-942 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | |
|
NIES-953 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) ; group E (Suzuki et al. 2022) |
|
NIES-2665 |
Umezakia ovalisporum | Blue-green alga ; Cyanobacteria | Freshwater (Water) | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) |
|
NIES-112 |
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) ; ST16 (Tanabe et al. 2007) |
|
NIES-947 |
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Picoplankton ; group I (Suzuki et al. 2022) |
| Reference |
|---|
|
Robertson, B. R., Tezuka, N., Watanabe, M. M.
2001
Phylogenetic analyses of Synechococcus strains (cyanobacteria) using sequences of 16S rDNA and part of the phycocyanin operon reveal multiple evolutionary lines and reflect phycobilin content.
Int. J. Syst. Evol. Microbiol.,
51,
861-871.
Keywords: cyanobacteria; phycocyanin; phylogeny; 16S rDNA; Synechococcus Strain(s): 937, 938, 939, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965 PubMed: 11411708 DOI: 10.1099/00207713-51-3-861 Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578. Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 Suzuki, S., Yamaguchi, H., Kawachi, M. 2022 Potential genetic diversity of Synechococcus-related strains maintained in the Microbial Culture Collection of the National Institute for Environmental Studies, Japan. Microb. Resour. Syst., 38, 63-74. Keywords: Synechococcus; Cyanobium; picoplankton; molecular marker Strain(s): 937, 938, 939, 940, 941, 942, 943, 945, 946, 947, 949, 950, 951, 952, 953, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 969, 970, 971, 972, 973, 974, 975, 976, 977, 978, 979, 981, 982, 983, 984, 985, 986, 987, 988, 1341, 1342, 1343, 1344, 1345, 1346, 1347, 1348 DOI: 10.60369/microresys.38.2_63 |
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