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Strain Data
| Strain number | NIES-566 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Chlorophyceae | |||
| Scientific name | Basichlamys sacculifera (Scherffel) Skuja | |||
| Synonym | Gonium sacculiferum Scherffel | |||
| Former name | ||||
| Common name | Green alga | |||
| Locality (Date of collection) | Fujisawa, Kanagawa, Japan (1983-08-01) | |||
| Latitude / Longitude | 35.368511 / 139.458862 | |||
| Habitat (Isolation source) | Freshwater (Pond sediment) | |||
| History | < Nozaki, Hisayoshi | |||
| Isolator (Date of isolation) | Nozaki, Hisayoshi (1983-09-07) | |||
| Identified by | Nozaki, Hisayoshi | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2018 Mar] | |||
|
Culture condition (Preculture condition) |
Medium:
AF-6
Temperature: 20 C Light intensity: 9-14 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 75 D |
|||
| Gene information | 18S rRNA ( LC086349 ) , atpB ( AB014015 ) , rbcL ( D63430 ) , psaA ( AB044416 ) , psaB ( AB044467 AB044468 ) , psbC ( AB044526 ) | |||
| Cell size (min - max) | ||||
| Organization | ||||
| Characteristics | Phototaxis ; Single celled | |||
| Other strain no. | Other strain no. : 3907-1 | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-1437
|
Basichlamys sacculifera | Green alga | Freshwater (Pond water) | Benthic ; Phototaxis |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-646 |
Gonium pectorale | Green alga | Freshwater (Pond sediment) | Phototaxis ; Heterothallic ; Isogamous ; Mating type (−) |
|
NIES-891 |
Volvox aureus | Green alga ; Volvocine alga | Freshwater (Lake water) | Phototaxis |
|
NIES-26 |
Nostoc minutum | Blue-green alga ; Cyanobacteria | Terrestrial | Chromatic adaptation |
|
NIES-2569 |
Volvox ovalis | Green alga ; Volvocine alga | Freshwater (Water) | Phototaxis ; Authentic strain |
NIES-528
|
Staurastrum paradoxum | Desmid | Freshwater (Lake water) | |
| Reference |
|---|
|
Mori, F., Erata, M., Watanabe, M. M.
2002
Cryopreservation of cyanobacteria and green algae in the NIES-Collection.
Microbiol. Cult. Coll.,
18,
45-55.
Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection Strain(s): 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 78, 79, 80, 81, 87, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 119, 120, 122, 123, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 138, 139, 144, 147, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185, 186, 187, 188, 189, 191, 192, 193, 194, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 224, 226, 227, 228, 229, 230, 231, 232, 241, 242, 243, 244, 245, 246, 248, 257, 259, 261, 263, 266, 267, 268, 287, 288, 289, 290, 294, 295, 297, 298, 299, 300, 301, 302, 303, 305, 306, 308, 309, 310, 312, 313, 329, 334, 337, 338, 339, 340, 341, 342, 349, 351, 359, 360, 361, 362, 375, 378, 379, 380, 382, 384, 385, 390, 394, 396, 397, 398, 415, 416, 418, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 437, 438, 439, 440, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 464, 468, 469, 474, 478, 479, 480, 481, 503, 504, 505, 506, 507, 509, 510, 512, 514, 515, 522, 523, 524, 527, 528, 529, 530, 531, 532, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 592, 593, 594, 595, 596, 597, 598, 604, 610, 628, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 672, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729 Nozaki, H. 1986 Notes on microalgae in Japan (9). Basichlamys sacculifera (Chlorophyta, Volvocales). Jpn. J. Phycol. (Sôrui), 34, 143 (in Japanese with English title). Strain(s): 566 Nozaki, H., Ito, M., Sano, R., Uchida, H., Watanabe, M. M., Kuroiwa, T. 1995 Phylogenetic relationships within the colonial Volvocales (Chlorophyta) inferred from rbcL gene sequence data. J. Phycol., 31, 970-979. Keywords: Chlorophyta; Goniaceae; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; molecular phylogeny; Tetrabaenaceae; Volvocaceae Strain(s): 418, 421, 456, 460, 541, 564, 566, 569, 571, 572, 574, 577, 653, 725, 731, 732, 734, 735, 737, 895 DOI: 10.1111/j.0022-3646.1995.00970.x Nozaki, H., Ito, M., Watanabe, M. M., Kuroiwa, T. 1996 Ultrastructure of the vegetative colonies and systematic position of Basichlamys (Volvocales, Chlorophyta). Eur. J. Phycol., 31, 67- 72. Keywords: Basichlamys sacculifera; Chlorophyta; cladistic analysis; phylogeny; Tetrabaenaceae; ultrastructure; Volvocales Strain(s): 566 DOI: 10.1080/09670269600651211a Nozaki, H., Misawa, K., Kajita, T., Kato, M., Nohara, S., Watanabe, M. M. 2000 Origin and evolution of the colonial Volvocales (Chlorophyceae) as inferred from multiple, chloroplast gene sequences. Mol. Phylogenet. Evol., 17, 256-268. Strain(s): 418, 456, 460, 474, 541, 545, 564, 566, 569, 571, 572, 574, 577, 582, 653, 654, 666, 720, 721, 722, 724, 725, 727, 728, 730, 731, 732, 734, 735, 736, 737, 851, 854, 872, 882, 884, 886, 887, 888, 889, 890, 893, 895, 896, 898 PubMed: 11083939 DOI: 10.1006/mpev.2000.0831 Nozaki, H., Ohta, N., Takano, H., Watanabe, M. M. 1999 Reexamination of phylogenetic relationships within the colonial Volvocales (Chlorophyta): an analysis of atpB and rbcL gene sequences. J. Phycol., 35, 104-112. Keywords: atpB gene; Chlorophyta; Gonium; molecular phylogeny; rbcL gene; Volvocaceae; volvocine series; Volvox Strain(s): 418, 456, 460, 541, 564, 566, 568, 569, 571, 572, 574, 577, 582, 653, 654, 666, 720, 721, 722, 724, 725, 727, 728, 730, 731, 732, 734, 735, 736, 737, 851, 852, 858, 861, 882, 884, 895 DOI: 10.1046/j.1529-8817.1999.3510104.x Nozaki, H., Onishi, K., Morita, E. 2002 Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). J. Mol. Evol., 55, 414-430. Keywords: ATP synthase β-subunit (atpB) gene; Chloromonas; gene evolution; large subunit of Rubisco (rbcL) gene; morphological evolution; P700 chlorophyll a-apoprotein A2 (psaB) gene; pyrenoid; Volvocales Strain(s): 96, 123, 144, 213, 418, 421, 425, 428, 432, 439, 446, 447, 456, 474, 522, 564, 566, 567, 569, 571, 574, 582, 653, 732, 851, 858, 861, 875, 882, 883, 968 PubMed: 12355262 DOI: 10.1007/s00239-002-2338-9 Nakada, T., Ito, T., Tomita, M. 2016 18S ribosomal RNA gene phylogeny of a colonial volvocalean lineage (Tetrabanaceae-Goniaceae-Volvocaceae, Volvocales, Chlorophyceae) and its close relatives. J. Jpn. Bot., 91, 345-354. Keywords: 18S rRNA; colonial; green algae; molecular phylogeny; unicellular; Volvocales Strain(s): 418, 456, 460, 474, 541, 544, 545, 564, 566, 571, 654, 666, 721, 725, 728, 735, 737, 867, 877, 879, 880, 881, 882, 883, 1362, 2242, 2246, 2266, 2567, 3388, 4126 Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E. 2018 Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae. Evolution, 72, 386-398. Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 Sausen, N., Malavasi, V., Melkonian, M. 2018 Molecular phylogeny, systematics and revision of the type species of Lobomonas, L. francei,(Volvocales, Chlorophyta) and closely related taxa. J. Phycol., 54, 198-214. Keywords: crystalline glycoprotein lattice; CWClade; ITS2; L. panduriformis; rbcL; Reinhardtinia; scanning electron microscopy; SSU nrRNA Strain(s): 257, 418, 456, 474, 541, 566, 577, 666, 735, 879, 880, 882, 883, 1362, 1708, 1858, 2567, 3923 PubMed: 29278416 DOI: 10.1111/jpy.12615 Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E. 2018 Multicellularity drives the evolution of sexual traits. Am. Nat., 192, E93-E10. Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 30125231 DOI: 10.1086/698301 Nakada, T., Tsuchida, Y., Tomita, M. 2019 Improved taxon sampling and multigene phylogeny of unicellular chlamydomonads closely related to the colonial volvocalean lineage Tetrabaenaceae-Goniaceae-Volvocaceae (Volvocales, Chlorophyceae). Mol. Phylogenet. Evol., 130 1-8. Keywords: Alga; Chlamydomonas; Colony evolution; Multigene phylogeny; Vitreochlamys; Zoosporangium Strain(s): 418, 437, 456, 460, 474, 541, 544, 545, 564, 566, 569, 571, 577, 654, 666, 721, 725, 728, 735, 737, 867, 879, 880, 882, 883, 887, 1362, 1858, 2462, 2567, 3383, 3388, 4241, 4242, 4243, 4244, 4245, 4246, 4247, 4248, 4249, 4250, 4251, 4252, 4253, 4254, 4255, 4256 PubMed: 30266459 DOI: 10.1016/j.ympev.2018.09.013 Hanschen, E. R., Davison, D. R., Ferris, P. J., Michod, R. E. 2018 On the rediscovery of Volvox perglobator (Volvocales, Chlorophyceae) and the evolution of outcrossing from self-fertilization. Evol. Ecol. Res., 19, 299-318. Keywords: homothallism; phylogenetics; reversion; self-fertilization; sexual reproduction; volvocine green algae Strain(s): 289, 421, 456, 458, 460, 474, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 872, 876, 877, 878, 880, 882, 1038, 1122, 1140, 1148, 1156, 1157, 1362, 1708, 1711, 1713, 1859, 2457, 2569, 2738, 3382, 3388, 3780, 3782, 3986, 4145, 4258, 4259, 4260 Lindsey, C. R., Rosenzweing, F., Herron, M. D. 2021 Phylotranscriptomics points to multiple independent origins of multicellularity and cellular differentiation in the volvocine algae. BMC Biol., 19, 182 (article ID). Keywords: Phylotranscriptomics; Volvocine algae; Green algae; Phylogeny; Multicellularity Strain(s): 418, 456, 458, 460, 541, 543, 544, 564, 566, 568, 572, 582, 653, 654, 717, 719, 720, 722, 725, 728, 730, 732, 736, 737, 851, 856, 863, 867, 868, 878, 882, 890, 893, 895, 1362, 1363, 2569, 2863, 3383, 4126, 4127, 4128 DOI: 10.1101/2021.03.16.435725 Chen, Y., Xiong, Q., Dai, Q., Liu, G. 2025 Six newly sequenced chloroplast genomes from quadriflagellate Chlamydomonadales (Chlorophyceae): Phylogeny and comparative genome analyses. Genome Biol. Evol., 17, evaf074 (article ID). Keywords: quadriflagellate chlamydomonadaleans; phylogenomics; Corbierea; PubMed: 40247659 DOI: 10.1093/gbe/evaf074 |
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