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Strain Data
| Strain number | NIES-611 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Pseudanabaena sp. | |||
| Synonym | ||||
| Former name | Phormidium tenue (C.Agardh ex Gomont) Anagnostidis et Komárek | |||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Lake Biwa, Shiga, Japan | |||
| Latitude / Longitude | 35.2852741059 / 136.08878954 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | ||||
| Isolator (Date of isolation) | ||||
| Identified by | Watanabe, Makoto M.; Homma, Takamitsu (Reidentify) | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
CT
Temperature: 25 C Light intensity: 100-120 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | 16S rRNA ( AB042842 ) | |||
| Cell size (min - max) | 3 - μm | |||
| Organization | Filamentous | |||
| Characteristics | ||||
| Other strain no. | Other strain no. : Bpt | |||
| Remarks | Cryopreserved | |||
| Movie | ||||
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Related strain information
(Large number of orders and same genus or species)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-512
|
Pseudanabaena foetida | Blue-green alga ; Cyanobacteria | Freshwater (Pond water) | Offensive odor ; Test strain (Nagai, T., 2016) ; 2-MIB production (Iwase et al. 2010) ; Type strain (Tuji & Niiyama 2016) |
|
NIES-3738 |
Pseudanabaena sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | |
|
NIES-305 |
Pseudanabaena sp. | Blue-green alga ; Cyanobacteria | Freshwater (Sediment) | |
|
NIES-4237 |
Pseudanabaena yagii | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | 2-MIB production (Tuji & Niiyama 2018) |
|
NIES-4065 |
Pseudanabaena cinerea | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Offensive odor ; 2-MIB production (Tuji & Niiyama 2018) ; Type strain (Tuji & Niiyama 2018) |
|
Related strain information
(Whose relevance due to simultaneous purchases and other information is inferred by AI)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
|
NIES-4062 |
Pseudanabaena cinerea | Blue-green alga ; Cyanobacteria | Freshwater (Reservoir water) | Offensive odor ; 2-MIB production (Tuji & Niiyama 2018) |
|
NIES-4063 |
Pseudanabaena cinerea | Blue-green alga ; Cyanobacteria | Freshwater (Reservoir water) | Offensive odor ; 2-MIB production (Tuji & Niiyama 2018) |
|
Related strain information
(Used in same reference)
|
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|---|---|---|---|---|
| Strain number | Scientific name | Common name | Habitat (Isolation source) | Characteristics |
NIES-945
|
Synechococcus sp. | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Picoplankton |
NIES-1069
|
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater (Pond water) | Cyanobacterial water bloom (aoko) ; Toxicity ; microcystin (+) (Tanabe et al. 2009b) ; ST35 (Tanabe et al. 2007) |
NIES-27
|
Spirulina subsalsa | Blue-green alga ; Cyanobacteria | ||
NIES-102
|
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) ; Toxicity ; microcystin (+) (Tanabe et al. 2009b) ; Genome decoded strain (Yamaguchi et al. 2020) ; ST10 (Tanabe et al. 2007) |
|
NIES-105 |
Microcystis aeruginosa | Blue-green alga ; Cyanobacteria | Freshwater (Lake water) | Cyanobacterial water bloom (aoko) ; ST12 (Tanabe et al. 2007) |
| Reference |
|---|
|
Harada, K-I., Ozaki, K., Tsuzuki, S., Kato, H., Hasegawa, M., Kuroda, E. K., Arii, S., Tsuji, K.
2009
Blue color formation of cyanobacteria with b-cyclocitral.
J. Chem. Ecol.,
35,
1295-1301.
Keywords: b-cyclocitral; cyanobacteria; lysis; blue color formation; acid stress Strain(s): 73, 102, 103, 112, 298, 611, 808 PubMed: 19936836 DOI: 10.1007/s10886-009-9706-5 Tomioka, N., Nagai, T., Kawasaki, T., Imai, A., Kohata, K. 2008 Quantification of Microcystis in a eutrophic lake by simple DNA extraction and SYBR green real-time PCR. Microbes Environ., 23, 306-312. Keywords: Microcystis; quantification; SYBR Green I; DNA extraction; eutrophic lake Strain(s): 98, 99, 204, 604, 611, 843, 946, 961 DOI: 10.1264/jsme2.ME08515 Oikawa, E. Ishibashi, Y., 2004 Species specificity of musty odor producing Phormidium tenue in Lake Kamafusa. Wat. Sci. Tech., 49, 41-46. Keywords: 16S-rDNA sequence; 2-methylisoborneol; musty odor; Phormidium tenue phylogenetic tree Strain(s): 21, 30, 33, 41, 73, 76, 512, 611 PubMed: 15237605 DOI: 10.2166/wst.2004.0529 Imanishi, S. Y., Nakayama, T., Asukabe, H., Harada, K. 2017 Application of MALDI Biotyper to cyanobacterial profiling. Rapid Commun. Mass Spectrom., 31, 325-332. Strain(s): 73, 89, 102, 103, 107, 112, 298, 611, 808, 809, 835, 843, 989, 1025, 1043, 1058, 1071, 1099, 1642, 1652, 1672 PubMed: 27862451 DOI: 10.1002/rcm.7793 Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578. Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 |
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